/dports/biology/gatk/gatk-4.2.0.0/src/test/resources/org/broadinstitute/hellbender/tools/walkers/MarkDuplicatesGATK/ |
H A D | markDuplicatesWithMateCigar.pairSet.swap.sam | 2 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:11c8af2a2528b25f2c080ab7da42edda SP:Mus musculus 3 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:f05d753079c455c0e57af88eeda24493 SP:Mus musculus 4 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:9b9d64dc89ecc73d3288eb38af3f94bd SP:Mus musculus 5 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:0a692666a1b8526e1d1e799beb71b6d0 SP:Mus musculus 6 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:f5993a04396a06ed6b28fa42b2429be0 SP:Mus musculus 7 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:f90804fb8fe9cb06076d51a710fb4563 SP:Mus musculus 8 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:258a37e20815bb7e3f2e974b9d4dd295 SP:Mus musculus 9 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:e0d6cea6f72cb4d9f8d0efc1d29dd180 SP:Mus musculus 10 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:5f217cb8a9685b9879add3ae110cabd7 SP:Mus musculus 11 …usculus_assembly9/bigZips/chromFa.tar.gz AS:mm9 M5:dde08574942fc18050195618cc3f35af SP:Mus musculus [all …]
|
/dports/biology/wise/wise2.4.1/src/test/ |
H A D | promoterwise.out | 17 EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB 15.07 0 19 EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB 76.75 0 21 EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB 32.05 0 34 >EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB) gene, complete cds. 56 >EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB) gene, complete cds. 83 >EM:MMENDOBA [2729-3525] M22832 Mus musculus cytokeratin (endoB) gene, complete cds.
|
/dports/biology/p5-BioPerl/BioPerl-1.7.7/t/data/ |
H A D | D12555.gbk | 2 DEFINITION Mus spretus gene for beta-casein, 3'UTR. 6 SOURCE Mus spretus (western wild mouse) 7 ORGANISM Mus spretus 9 Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. 28 /organism="Mus spretus"
|
H A D | BK000016-tpa.gbk | 2 DEFINITION TPA: Mus musculus pantothenate kinase 4 mRNA, partial cds. 6 SOURCE Mus musculus (house mouse) 7 ORGANISM Mus musculus 9 Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. 32 /organism="Mus musculus"
|
H A D | blast.report | 35 gb|U42383|MMU42383 Mus musculus fibroblast growth factor inducib... 40 0.10 45 gb|U70654|MMU70654 Mus musculus musculus sex determining protein... 36 1.1 48 gb|U70653|MMU70653 Mus musculus musculus sex determining protein... 36 1.1 53 gb|U70655|MMU70655 Mus musculus sex determining protein (Sry) ge... 36 1.5 56 gb|U70651|MMU70651 Mus musculus musculus sex determining protein... 36 2.0 57 gb|U70652|MMU70652 Mus musculus musculus sex determining protein... 36 2.0 69 gb|U03645|MMU03645 Mus musculus domesticus Torino (Sry) gene, co... 35 3.4 70 gb|U70641|MMU70641 Mus musculus domesticus sex determining prote... 35 3.4 71 gb|U70650|MMU70650 Mus musculus domesticus sex determining prote... 35 3.4 72 gb|U70642|MMU70642 Mus musculus domesticus sex determining prote... 35 3.4 [all …]
|
/dports/www/phpgroupware/phpgroupware-0.9.16.017/headlines/setup/ |
H A D | phpgw_cs.lang | 12 you must enter a base url admin cs Mus�te zadat z�kladn� URL adresu 13 you must enter a display admin cs Mus�te zadat obrazovku 14 you must enter a news url admin cs Mus�te zadat URL adresu news 15 you must enter the number of listings display admin cs Mus�te zadat po�et zobrazen�ch z�znam� 16 you must enter the number of minutes between reload admin cs Mus�te zadat po�et minut mezi opakov�n…
|
/dports/biology/emboss/EMBOSS-6.6.0/doc/programs/master/emboss/apps/inc/ |
H A D | shuffleseq.input | 17 DE Mus musculus (cell line C3H/F2-11) chromosome 12 anti-DNA antibody heavy 22 OS Mus musculus (house mouse) 25 OC Muridae; Murinae; Mus; Mus. 41 FT /organism="Mus musculus"
|
H A D | shuffleseq.output | 7 >L48662 L48662.1 Mus musculus (cell line C3H/F2-11) chromosome 12 anti-DNA antibody heavy chain … 15 >L48662 L48662.1 Mus musculus (cell line C3H/F2-11) chromosome 12 anti-DNA antibody heavy chain …
|
/dports/biology/py-biopython/biopython-1.79/Tests/GenBank/ |
H A D | qualifier_escaping_write.gb | 2 DEFINITION interferon beta, fibroblast [Mus musculus]. 7 ORGANISM Mus musculus 9 Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. 20 /organism="Mus musculus"
|
H A D | protein_refseq.gb | 2 DEFINITION interferon beta, fibroblast [Mus musculus]. 9 ORGANISM Mus musculus 11 Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. 22 /organism="Mus musculus"
|
H A D | qualifier_escaping_read.gb | 2 DEFINITION interferon beta, fibroblast [Mus musculus]. 7 ORGANISM Mus musculus 9 Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. 20 /organism="Mus musculus"
|
/dports/math/py-spvcm/spvcm-0.3.0/spvcm/svc/ |
H A D | model.py | 136 Mus=None, Betas=None, Tau2=2): 150 if Mus is None: 151 Mus = np.zeros((1,self.state.p)) 152 self.state.Mus = Mus 214 self.state.Mus += np.random.normal(0,10,size=self.state.Mus.shape) 235 st.tiled_Mus = np.kron(st.iota_n, st.Mus.reshape(-1,1)) 255 st.Mus = chol_mvn(st.Mus_mean, S) 256 st.tiled_Mus = np.kron(st.iota_n, st.Mus)
|
/dports/biology/p5-BioPerl-Run/BioPerl-Run-1.007003/t/ |
H A D | Ensembl.t | 44 # -use_orthologues => 'Mus musculus', 51 # -use_orthologues => 'Mus musculus', 54 # -use_orthologues => 'Mus musculus', 62 # -use_orthologues => 'Mus musculus', 66 # -use_orthologues => 'Mus musculus',
|
/dports/biology/hmmer/hmmer-3.3/easel/demotic/regress/ |
H A D | wu-blastp-tbl.out | 34 …p|Q1XGE2|HAC1_ASPOR 429 680 sp|Q9WVS8|MK07_MOUSE Mitogen-activated protein kinase 7 OS=Mus musculus 50 0.00053 28 72 222 sp|Q1XGE2|HAC1_ASPOR 145 290 sp|P13346|FOSB_MOUSE Protein fosB OS=Mus musculus GN… 94 0.0040 26 2 237 sp|Q1XGE2|HAC1_ASPOR 57 297 sp|P01101|FOS_MOUSE Proto-oncogene c-Fos OS=Mus musculu… 127 …sp|Q1XGE2|HAC1_ASPOR 281 460 sp|Q4QRL3|CC88B_MOUSE Coiled-coil domain-containing protein 88B OS=Mus 128 …|Q1XGE2|HAC1_ASPOR 1164 1243 sp|Q4QRL3|CC88B_MOUSE Coiled-coil domain-containing protein 88B OS=Mus 160 …sp|Q1XGE2|HAC1_ASPOR 628 858 sp|Q6P9R4|ARHGI_MOUSE Rho guanine nucleotide exchange factor 18 OS=Mus 162 …sp|Q1XGE2|HAC1_ASPOR 530 669 sp|A2AJI0|MA7D1_MOUSE MAP7 domain-containing protein 1 OS=Mus musculus 163 …sp|Q1XGE2|HAC1_ASPOR 570 748 sp|A2AJI0|MA7D1_MOUSE MAP7 domain-containing protein 1 OS=Mus musculus 164 … sp|Q1XGE2|HAC1_ASPOR 58 202 sp|A2AJI0|MA7D1_MOUSE MAP7 domain-containing protein 1 OS=Mus musculus 241 0.072 24 49 150 sp|Q1XGE2|HAC1_ASPOR 326 428 sp|P26041|MOES_MOUSE Moesin OS=Mus musculus GN=Msn PE=… [all …]
|
H A D | ssearch-tbl.out | 25 0.12 25 9 222 sp|Q1XGE2|HAC1_ASPOR 76 290 sp|P13346|FOSB_MOUSE Protein fosB OS=Mus musculus GN=F 52 1 25 2 237 sp|Q1XGE2|HAC1_ASPOR 57 297 sp|P01101|FOS_MOUSE Proto-oncogene c-Fos OS=Mus muscul 62 1.4 25 9 254 sp|Q1XGE2|HAC1_ASPOR 105 350 sp|Q03173|ENAH_MOUSE Protein enabled homolog OS=Mus mu 73 1.9 26 44 232 sp|Q1XGE2|HAC1_ASPOR 72 265 sp|P48755|FOSL1_MOUSE Fos-related antigen 1 OS=Mus mus 79 2 24 4 216 sp|Q1XGE2|HAC1_ASPOR 39 260 sp|P47930|FOSL2_MOUSE Fos-related antigen 2 OS=Mus mus 82 2.1 27 51 190 sp|Q1XGE2|HAC1_ASPOR 23 183 sp|O35426|XBP1_MOUSE X-box-binding protein 1 OS=Mus mu 85 2.3 27 14 163 sp|Q1XGE2|HAC1_ASPOR 174 319 sp|P54841|MAFB_MOUSE Transcription factor MafB OS=Mus 111 4 26 47 193 sp|Q1XGE2|HAC1_ASPOR 5 156 sp|Q61827|MAFK_MOUSE Transcription factor MafK OS=Mus 139 6.8 25 2 148 sp|Q1XGE2|HAC1_ASPOR 142 290 sp|Q8BW74|HLF_MOUSE Hepatic leukemia factor OS=Mus mus 145 7.3 24 80 285 sp|Q1XGE2|HAC1_ASPOR 588 784 sp|Q3UIW5|RNF10_MOUSE RING finger protein 10 OS=Mus mu [all …]
|
/dports/biology/infernal/infernal-1.1.3/easel/demotic/regress/ |
H A D | wu-blastp-tbl.out | 34 …p|Q1XGE2|HAC1_ASPOR 429 680 sp|Q9WVS8|MK07_MOUSE Mitogen-activated protein kinase 7 OS=Mus musculus 50 0.00053 28 72 222 sp|Q1XGE2|HAC1_ASPOR 145 290 sp|P13346|FOSB_MOUSE Protein fosB OS=Mus musculus GN… 94 0.0040 26 2 237 sp|Q1XGE2|HAC1_ASPOR 57 297 sp|P01101|FOS_MOUSE Proto-oncogene c-Fos OS=Mus musculu… 127 …sp|Q1XGE2|HAC1_ASPOR 281 460 sp|Q4QRL3|CC88B_MOUSE Coiled-coil domain-containing protein 88B OS=Mus 128 …|Q1XGE2|HAC1_ASPOR 1164 1243 sp|Q4QRL3|CC88B_MOUSE Coiled-coil domain-containing protein 88B OS=Mus 160 …sp|Q1XGE2|HAC1_ASPOR 628 858 sp|Q6P9R4|ARHGI_MOUSE Rho guanine nucleotide exchange factor 18 OS=Mus 162 …sp|Q1XGE2|HAC1_ASPOR 530 669 sp|A2AJI0|MA7D1_MOUSE MAP7 domain-containing protein 1 OS=Mus musculus 163 …sp|Q1XGE2|HAC1_ASPOR 570 748 sp|A2AJI0|MA7D1_MOUSE MAP7 domain-containing protein 1 OS=Mus musculus 164 … sp|Q1XGE2|HAC1_ASPOR 58 202 sp|A2AJI0|MA7D1_MOUSE MAP7 domain-containing protein 1 OS=Mus musculus 241 0.072 24 49 150 sp|Q1XGE2|HAC1_ASPOR 326 428 sp|P26041|MOES_MOUSE Moesin OS=Mus musculus GN=Msn PE=… [all …]
|
H A D | ssearch-tbl.out | 25 0.12 25 9 222 sp|Q1XGE2|HAC1_ASPOR 76 290 sp|P13346|FOSB_MOUSE Protein fosB OS=Mus musculus GN=F 52 1 25 2 237 sp|Q1XGE2|HAC1_ASPOR 57 297 sp|P01101|FOS_MOUSE Proto-oncogene c-Fos OS=Mus muscul 62 1.4 25 9 254 sp|Q1XGE2|HAC1_ASPOR 105 350 sp|Q03173|ENAH_MOUSE Protein enabled homolog OS=Mus mu 73 1.9 26 44 232 sp|Q1XGE2|HAC1_ASPOR 72 265 sp|P48755|FOSL1_MOUSE Fos-related antigen 1 OS=Mus mus 79 2 24 4 216 sp|Q1XGE2|HAC1_ASPOR 39 260 sp|P47930|FOSL2_MOUSE Fos-related antigen 2 OS=Mus mus 82 2.1 27 51 190 sp|Q1XGE2|HAC1_ASPOR 23 183 sp|O35426|XBP1_MOUSE X-box-binding protein 1 OS=Mus mu 85 2.3 27 14 163 sp|Q1XGE2|HAC1_ASPOR 174 319 sp|P54841|MAFB_MOUSE Transcription factor MafB OS=Mus 111 4 26 47 193 sp|Q1XGE2|HAC1_ASPOR 5 156 sp|Q61827|MAFK_MOUSE Transcription factor MafK OS=Mus 139 6.8 25 2 148 sp|Q1XGE2|HAC1_ASPOR 142 290 sp|Q8BW74|HLF_MOUSE Hepatic leukemia factor OS=Mus mus 145 7.3 24 80 285 sp|Q1XGE2|HAC1_ASPOR 588 784 sp|Q3UIW5|RNF10_MOUSE RING finger protein 10 OS=Mus mu [all …]
|
/dports/games/hedgewars-server/hedgewars-src-1.0.0/hedgewars/ |
H A D | uSound.pas | 478 if Mus <> nil then 482 Mus:= nil; 855 if Mus <> nil then 859 if Mus = nil then 977 if Mus <> nil then 978 Mix_PauseMusic(Mus); 986 if Mus <> nil then 1005 if Mus <> nil then 1007 Mix_FreeMusic(Mus); 1008 Mus:= nil; [all …]
|
/dports/games/hedgewars/hedgewars-src-1.0.0/hedgewars/ |
H A D | uSound.pas | 478 if Mus <> nil then 482 Mus:= nil; 855 if Mus <> nil then 859 if Mus = nil then 977 if Mus <> nil then 978 Mix_PauseMusic(Mus); 986 if Mus <> nil then 1005 if Mus <> nil then 1007 Mix_FreeMusic(Mus); 1008 Mus:= nil; [all …]
|
/dports/biology/emboss/EMBOSS-6.6.0/test/data/ |
H A D | tropomyosin.fasta | 14 >embl:BE848719 BE848719; uw40c07.y1 Soares_thymus_2NbMT Mus musculus cDNA clone IMAGE:3419148 5' si… 27 >embl:BF022813 BF022813; uw40c07.x1 Soares_thymus_2NbMT Mus musculus cDNA clone IMAGE:3419148 3' si… 35 >embl:BF452255 BF452255; uz86d11.y1 NCI_CGAP_Lu29 Mus musculus cDNA clone IMAGE:3675957 5' similar … 45 >embl:BG089808 BG089808; mab82b11.x1 NCI_CGAP_BC3 Mus musculus cDNA clone IMAGE:3976676 3' similar … 57 >embl:BG147728 BG147728; mab53f06.x1 Soares_NMEBA_branchial_arch Mus musculus cDNA clone IMAGE:3974…
|
/dports/biology/py-biopython/biopython-1.79/Tests/Hmmer/ |
H A D | domtab_30_hmmsearch_001.out | 4 … 260 59 318 59 318 0.95 Ribosomal protein S6 kinase alpha-2 OS=Mus musculus GN=Rps6ka2… 5 … 260 415 672 415 672 0.97 Ribosomal protein S6 kinase alpha-2 OS=Mus musculus GN=Rps6ka2… 16 … 260 68 327 68 327 0.95 Ribosomal protein S6 kinase alpha-3 OS=Mus musculus GN=Rps6ka3… 17 … 260 422 679 422 679 0.97 Ribosomal protein S6 kinase alpha-3 OS=Mus musculus GN=Rps6ka3…
|
/dports/misc/p5-Geo-Address-Formatter/Geo-Address-Formatter-1.96/address-formatting/testcases/countries/ |
H A D | gp.yaml | 8 museum: Musée Lherminier 15 Musée Lherminier
|
/dports/biology/p5-BioPerl-Run/BioPerl-Run-1.007003/t/data/taxdump/ |
H A D | names.dmp | 120 10088 | Mus | | scientific name | 122 10088 | mice | mice <genus Mus> | common name | 124 10090 | Mus muscaris | | misnomer | 125 10090 | Mus musculus | | scientific name | 126 10090 | Mus sp. 129SV | | includes |
|
/dports/biology/emboss/EMBOSS-6.6.0/test/genbank/ |
H A D | gbrod1.seq | 2 DEFINITION Mus musculus (cell line C3H/F2-11) chromosome 12 anti-DNA antibody 7 SOURCE Mus musculus (house mouse) 8 ORGANISM Mus musculus 11 Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus. 21 /organism="Mus musculus"
|
/dports/biology/p5-Bio-Phylo/Bio-Phylo-v2.0.1/t/ |
H A D | regress_21417.t | 14 …(Mus-NUM2,Danio)),(Monosiga_ovata,Monosiga_brevicollis-NUM2),(Beroe,Rhabdocalyptus),(Eunicella,Fun…
|