Searched refs:NUC_A (Results 1 – 3 of 3) sorted by relevance
433 freqa = seq->basefrequencies[NUC_A]; in getbasefreqs()551 treedata[NUC_A] = oneseqerr; in set_nucleotide()571 treedata[NUC_A] = oneseqerr; in set_nucleotide()576 treedata[NUC_A] = oneseqerr23; in set_nucleotide()581 treedata[NUC_A] = oneseqerr23; in set_nucleotide()601 treedata[NUC_A] = seqerr; in set_nucleotide()608 treedata[NUC_A] = oneseqerr3; in set_nucleotide()615 treedata[NUC_A] = oneseqerr3; in set_nucleotide()622 treedata[NUC_A] = oneseqerr3; in set_nucleotide()1723 freqa = seq->basefrequencies[NUC_A]; in snp_invariants_original()[all …]
567 #define NUC_A 0 macro
3077 freqa = seq->basefrequencies[NUC_A]; in nuview_sequence()3270 freqa = seq->basefrequencies[NUC_A]; in nuview_sequence_slow()3504 freqa = seq->basefrequencies[NUC_A]; in nuview_ancestral()3607 freqa = seq->basefrequencies[NUC_A]; in pseudonu_seq()3811 freqa = seq->basefrequencies[NUC_A]; in pseudonu_seq_slow()4065 freqa = seq->basefrequencies[NUC_A]; in pseudonu_anc()4135 freqa = seq->basefrequencies[NUC_A]; in pseudo_tl_anc()4181 freqa = seq->basefrequencies[NUC_A]; in pseudo_tl_seq()4268 freqa = seq->basefrequencies[NUC_A]; in pseudo_tl_snp()4368 freqa = seq->basefrequencies[NUC_A]; in pseudo_tl_snp_unlinked()[all …]