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Searched refs:N_Node (Results 1 – 25 of 135) sorted by relevance

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/dports/science/afni/afni-AFNI_21.3.16/src/SUMA/
H A DSUMA_HomerFunc.c177 int *FaceSetList=NULL, N_Node, N_FaceSet; in SUMA_HJS_Surface() local
186 NodeList = SUMA_HomerVertex(X1_X5_Sphere_vertex, &N_Node); in SUMA_HJS_Surface()
190 NodeList = SUMA_HomerVertex(X1_X5_X12_lleg_vertex, &N_Node); in SUMA_HJS_Surface()
194 NodeList = SUMA_HomerVertex(X1_X5_X12_Rleg_vertex, &N_Node); in SUMA_HJS_Surface()
198 NodeList = SUMA_HomerVertex(X1_X5_X12_Sphere_vertex, &N_Node); in SUMA_HJS_Surface()
202 NodeList = SUMA_HomerVertex(X1_X5_X12_X31_Sphere_vertex, &N_Node); in SUMA_HJS_Surface()
206 NodeList = SUMA_HomerVertex(X1_X5_X44_X45_vertex, &N_Node); in SUMA_HJS_Surface()
210 NodeList = SUMA_HomerVertex(X1_X5_X44_Torus_vertex, &N_Node); in SUMA_HJS_Surface()
255 &N_Node); in SUMA_HJS_Surface()
276 FuncName, ipart, N_Node, N_FaceSet); in SUMA_HJS_Surface()
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H A DSUMA_TestDataSets.c36 int kar, *Node = NULL, N_Node=-1; in main() local
72 int i, i3, *node = NULL, N_Node; in main() local
82 N_Node = 50; in main()
83 node = (int *)SUMA_malloc(N_Node * sizeof(int)); in main()
84 r = (float *)SUMA_malloc(N_Node * sizeof(float)); in main()
88 for (i=0; i<N_Node; ++i) { in main()
90 r[i] = sin((float)i/N_Node*5); in main()
91 g[i] = sin((float)i/N_Node*10); in main()
92 b[i] = cos((float)i/N_Node*7); in main()
98 for (i=0; i<N_Node; ++i) { in main()
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H A DSUMA_LocalStat.c210 ++Clust->N_Node; in SUMA_Build_Cluster_From_Node()
347 ++Clust->N_Node; \
1014 ni = SO->N_Node; in SUMA_DsetExtrema()
1416 if (Clust->N_Node > 1) Clust->varvalue /= (Clust->N_Node - 1); in SUMA_FindClusters()
1604 if (cd->N_Node < 5) max = cd->N_Node; else max = 5; in SUMA_Show_SurfClust_list_Info()
1855 if (FullList) N_Node = SO->N_Node; in SUMA_SurfClust_list_2_DsetMask()
1862 N_Node += cd->N_Node; in SUMA_SurfClust_list_2_DsetMask()
1985 if (cd->N_Node == SO->N_Node) { in SUMA_ClusterCenterofMass()
2018 if (cd->N_Node == 1) { in SUMA_ClusterCenterofMass()
2086 if (cd->N_Node == 1) { in SUMA_ClusterCenterofMass()
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H A DSUMA_SurfSmooth.c1504 for (i=0; i<SO->N_Node; ++i) { in main()
1617 if (nvec != SO->N_Node) { in main()
1683 if (nvec != SO->N_Node) { in main()
1753 if (SDSET_VECLEN(dset) != SO->N_Node) { in main()
1839 if (SDSET_VECLEN(dset) != SO->N_Node) { in main()
2367 for (jj=0;jj<SO->N_Node;++jj) in main()
2435 if (SDSET_VECLEN(dset) != SO->N_Node) { in main()
2505 if (SDSET_VECLEN(dset) != SO->N_Node) { in main()
2569 SO->N_Node, 3, 1, in main()
2598 SO->N_Node, 3, 1, in main()
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H A DSUMA_BrainSkin.c455 for (i=0; i < SO->N_Node; ++i) in calcWithOffsets()
538 SO->N_Node); in calcWithOffsets()
662 for (i=0; i < SO->N_Node; ++i) in SUMA_calcWithOffsets_Skin()
811 SO->N_Node); in SUMA_calcWithOffsets_Skin()
929 for (i=0; i < SO->N_Node; ++i) in SUMA_whatdoicallthis()
1220 for (ii=0; ii<SO->N_Node; ++ii) { in SUMA_ProjectSO_Nodes()
1546 for (ii=0; ii<SO->N_Node; ++ii) { in main()
1565 for (ii=0; ii<SO->N_Node; ++ii) { in main()
1638 for (ii=0; ii<SO->N_Node; ++ii) { in main()
1653 for (ii=0; ii<SO->N_Node; ++ii) { in main()
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H A DSUMA_Homer.c19 int N_Node = 0, N_FaceSet = 0, in main() local
73 SOv[ipart]->NodeList, SOv[ipart]->N_Node, SOv[ipart]->NodeDim, in main()
76 SOv[ipart]->Center[0] /= SOv[ipart]->N_Node; in main()
77 SOv[ipart]->Center[1] /= SOv[ipart]->N_Node; in main()
78 SOv[ipart]->Center[2] /= SOv[ipart]->N_Node; in main()
84 SN = SUMA_SurfNorm(SOv[ipart]->NodeList, SOv[ipart]->N_Node, in main()
H A DSUMA_GeomComp.c297 *N_Nodep = N_Node; in SUMA_Subdivide_Mesh()
1536 if (N_Node <= 0) { in SUMA_Initialize_getoffsets()
2630 if ( ( SO->N_Node != SOref->N_Node in SUMA_EquateSurfaceAreas()
2694 if ( (SO->N_Node != SOref->N_Node || in SUMA_EquateSurfaceVolumes()
2826 istp = SO->N_Node; in SUMA_ProjectSurfaceToSphere()
9661 c[0] /= N_Node; c[1] /= N_Node; c[2] /= N_Node; in SUMA_OrientTriangles()
9910 SO->N_Node += iso->N_Node; in SUMA_MergeSurfs()
9974 int N_Node = 0; in SUMA_Patch2Surf() local
9996 SO->N_Node = 0; in SUMA_Patch2Surf()
10455 Patch = SUMA_getPatch (Nodes, N_Node, SO->N_Node, in SUMA_GetContour()
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H A DSUMA_SurfDist.c264 int N_Node = 7; in main() local
282 FirstNeighb = (int **)calloc(N_Node, sizeof(int*)); in main()
283 FirstNeighbDist = (float **)calloc(N_Node, sizeof(float*)); in main()
406 SO->N_Node, &N_inmask)) in main()
418 } else if (Opt->iopt < 0 || Opt->iopt >= SO->N_Node) { in main()
420 "Have START = %d \n", Opt->iopt, SO->N_Node); in main()
448 SO->N_Node))) { in main()
474 if ( Nfrom < 0 || Nfrom >= SO->N_Node || in main()
475 Nto < 0 || Nto >= SO->N_Node || in main()
492 if (Nfrom < 0 || Nfrom >= SO->N_Node || in main()
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H A DSUMA_gts.c59 vertices = (GtsVertex **)g_malloc (SO->N_Node * sizeof (GtsVertex *)); in SumaToGts()
61 for ( i=0; i< SO->N_Node*3; i+=3) in SumaToGts()
70 … , n, SO->N_Node-1, SO->NodeList[i], SO->NodeList[i+1], SO->NodeList[i+2] in SumaToGts()
148 SO->N_Node = gts_surface_vertex_number(gs);
149 SO->NodeList = (float*) SUMA_calloc(SO->N_Node * 3, sizeof(float));
184 if (*i >= SO->N_Node || *i < 0)
222 if (iresult >= SO->N_Node || iresult < 0)
235 if (iresult >= SO->N_Node || iresult < 0)
248 if (iresult >= SO->N_Node || iresult < 0)
296 new_N_Nodes = (int)(new_N_Nodes*SO->N_Node); in SUMA_Mesh_Resample_nodes()
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H A DSUMA_BrainWrap.h135 refNodeList = (float *)SUMA_malloc(sizeof(float)*SO->N_Node*3); \
142 SO->N_Node * 3 * sizeof(float)); /* copy original coords */ \
149 for (m_in=0; m_in < SO->N_Node; ++m_in) { \
158 for (m_in=0; m_in < SO->N_Node; ++m_in) { \
177 refNodeList = (float *)SUMA_malloc(sizeof(float)*SO->N_Node*3); \
188 SO->N_Node * 3 * sizeof(float));\
191 m_SOref.NodeList = refNodeList; m_SOref.N_Node = SO->N_Node; \
218 m_touchup = (float *)SUMA_calloc(SO->N_Node, sizeof(float)); \
220 for (m_in=0; m_in<SO->N_Node; ++m_in) { \
297 for (m_in=0; m_in<SO->N_Node; ++m_in) { \
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H A DSUMA_toy_circle.c392 Ci->N_Node = opt->N_sub; in main()
395 Ci->N_Node = 2 + 10 * SUMA_POW2(opt->N_sub); in main()
397 FuncName, Ci->N_Node, opt->N_sub); in main()
408 Ci->Theta = (double *)SUMA_malloc(Ci->N_Node * 3 * sizeof (double)); in main()
415 for (i = 0; i < Ci->N_Node; ++i) in main()
422 Ci->Theta[i3 ] = (2.0* SUMA_PI / Ci->N_Node)*i; in main()
441 for (i = 0; i < 3*Ci->N_Node; ++i) { in main()
477 for (i = 0; i < Ci->N_Node; ++i) { in main()
491 for (i = 0; i < 3*Ci->N_Node; ++i) { in main()
683 for (i = 0; i < 3*Ci->N_Node; ++i) Ci->VelocityField[i] = 0.0; in main()
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H A DSUMA_SampBias.c217 SUMA_GET_OFFSET_STRUCT *OffS = SUMA_Initialize_getoffsets (SO->N_Node); in calcWithOffsets()
266 Nd=(int *)SUMA_calloc(SO->N_Node, sizeof(int)); in calcWithOffsets()
267 Pr=(int *)SUMA_calloc(SO->N_Node, sizeof(int)); in calcWithOffsets()
268 Lj=(int *)SUMA_calloc(SO->N_Node, sizeof(int)); in calcWithOffsets()
269 gD=(float *)SUMA_calloc(SO->N_Node, sizeof(float)); in calcWithOffsets()
270 pD=(float *)SUMA_calloc(SO->N_Node, sizeof(float)); in calcWithOffsets()
271 rD=(float *)SUMA_calloc(SO->N_Node, sizeof(float)); in calcWithOffsets()
278 for (i=0; i < SO->N_Node; ++i) in calcWithOffsets()
297 etime_GetOffset * SO->N_Node / 60.0 / (i+1)); in calcWithOffsets()
361 SO->N_Node); in calcWithOffsets()
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H A DSUMA_ROIgrow.c279 OffS = SUMA_Initialize_getoffsets (SO->N_Node); in SUMA_ROIgrow()
281 nmask = (byte *)SUMA_calloc(SO->N_Node, sizeof(byte)); in SUMA_ROIgrow()
357 FuncName, lim, etime_GetOffset_all / 60.0 , SO->N_Node); in SUMA_ROIgrow()
378 for (m_i=0; m_i<SO->N_Node; ++m_i) { \
384 for (m_i=0; m_i<SO->N_Node; ++m_i) { \
483 if (nodeind[i] < 0 || nodeind[i] >= SO->N_Node) { in main()
488 FuncName, nodeind[i], Opt->in_nodeindices, i, SO->N_Node); in main()
509 SO->N_Node); in main()
510 N_nodelabels = N_nodeind = SO->N_Node; in main()
639 SO->NodeList, SO->N_Node, in main()
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H A DSUMA_SurfPatch.c493 N_FaceSet = -1, N_Node = -1, N_Spec=0; in main() local
652 adj_N = SUMA_calloc(SO1->N_Node, sizeof(byte)); in main()
683 SUMA_WRITE_IND_ARRAY_1D(adj_N, NULL, SO1->N_Node, 1, ppref); in main()
707 ptch = SUMA_getPatch (NodePatch, N_NodePatch, SO->N_Node, in main()
737 N_Node = SO->N_Node; in main()
747 SOnew = SUMA_Patch2Surf(SO->NodeList, SO->N_Node, in main()
755 SO->N_Node = SOnew->N_Node; in main()
766 for (cnt=0; cnt < SO->NodeDim*SO->N_Node; ++cnt) in main()
788 if (SUMA_NodeDepth(SO->NodeList, SO->N_Node, E1_DIR_PRJ, &dpth, in main()
807 SO->N_Node = N_Node; N_Node = -1; in main()
H A DSUMA_GeomComp.h160 SUMA_GET_OFFSET_STRUCT *SUMA_Initialize_getoffsets (int N_Node);
294 int *Nodes, int N_Node,
333 SUMA_Boolean SUMA_vec_3dfind_to_3dmm (float *NodeList, int N_Node,
335 SUMA_Boolean SUMA_vec_3dmm_to_3dfind (float *NodeList, int N_Node,
337 SUMA_Boolean SUMA_vec_dicomm_to_3dfind (float *NodeList, int N_Node,
341 SUMA_Boolean SUMA_vec_3dmm_to_dicomm (float *NodeList, int N_Node,
343 SUMA_Boolean SUMA_vec_dicomm_to_3dmm (float *NodeList, int N_Node,
364 int SUMA_OrientTriangles (float *NodeList, int N_Node,
408 SUMA_DSET *SUMA_RandomDset(int N_Node, int nc, unsigned int seed,
424 int SUMA_NodeDepth(float *NodeList, int N_Node, SUMA_PC_PROJ prjdir,
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H A DSUMA_inflate_compare.c219 num_nodes1 = SO1->N_Node; in main()
220 num_nodes2 = SO2->N_Node; in main()
224 SN1 = SUMA_SurfNorm(SO1->NodeList, SO1->N_Node, SO1->FaceSetList, SO1->N_FaceSet); in main()
254 SN1 = SUMA_SurfNorm(SO1->NodeList, SO1->N_Node, SO1->FaceSetList, SO1->N_FaceSet); in main()
255 SN2 = SUMA_SurfNorm(SO2->NodeList, SO2->N_Node, SO2->FaceSetList, SO2->N_FaceSet); in main()
259 Memb = SUMA_MemberFaceSets (SO2->N_Node, SO2->FaceSetList, SO2->N_FaceSet, 3, SO2->idcode_str); in main()
290 isin = SUMA_isinbox (SO2->NodeList, SO2->N_Node, P0, B_dim, 0); in main()
294 SO2->N_Node, SO2->FaceSetList, SO2->N_FaceSet, in main()
326 triangle = SUMA_MT_intersect_triangle(p1,p2, SO2->NodeList, SO2->N_Node, in main()
H A DSUMA_Surface_IO.c453 if (!Found || SO->N_Node < 0 || SO->N_Node > 999999999) { in SUMA_MNI_OBJ_Read()
1250 …SF->NodeId[SF->N_Node-2], SF->NodeList[ND*(SF->N_Node-2)], SF->NodeList[ND*(SF->N_Node-2)+1], SF->… in SUMA_Show_SureFit()
1251 …SF->NodeId[SF->N_Node-1], SF->NodeList[ND*(SF->N_Node-1)], SF->NodeList[ND*(SF->N_Node-1)+1], SF->… in SUMA_Show_SureFit()
3189 if (FS->N_Node < 0 || FS->N_Node > 2000000) { in SUMA_FreeSurfer_ReadBin_eng()
3271 …FS->NodeId[FS->N_Node-2], FS->NodeList[3*(FS->N_Node-2)], FS->NodeList[3*(FS->N_Node-2)+1], FS->No… in SUMA_Show_FreeSurfer()
3272 …FS->NodeId[FS->N_Node-1], FS->NodeList[3*(FS->N_Node-1)], FS->NodeList[3*(FS->N_Node-1)+1], FS->No… in SUMA_Show_FreeSurfer()
3281 …FS->NodeList[3*(FS->N_Node-2)], FS->NodeList[3*(FS->N_Node-2)+1], FS->NodeList[3*(FS->N_Node-2)+2], in SUMA_Show_FreeSurfer()
3282 …FS->NodeList[3*(FS->N_Node-1)], FS->NodeList[3*(FS->N_Node-1)+1], FS->NodeList[3*(FS->N_Node-1)+2]… in SUMA_Show_FreeSurfer()
3670 SO->N_Node=0; in SUMA_BrainVoyager_Read()
5180 if (!SO->N_Node) { in SUMA_VEC_Read()
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H A DSUMA_3dSkullStrip.c2201 for (i=0; i<SO->N_Node; ++i) { in main()
2222 for (i=0; i<SO->N_Node; ++i) { in main()
2279 for (i=0; i<SO->N_Node; ++i) { in main()
2298 for (i=0; i<SO->N_Node; ++i) in main()
2832 for (i=0; i<SO->N_Node; ++i) { in main()
2850 for (i=0; i<SO->N_Node; ++i) { in main()
2859 for (i=0; i<SO->N_Node; ++i) { in main()
2867 for (i=0; i<SO->N_Node; ++i) { in main()
2875 for (i=0; i<SO->N_Node; ++i) { in main()
2956 SO->Center[0] /= (float)SO->N_Node; in main()
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H A DSUMA_VolData.c1250 for (i=0; i < N_Node; ++i) { in SUMA_Apply_Coord_xform()
1391 for (i=0; i < SO->N_Node; ++i) { in SUMA_Apply_VolReg_Trans()
1410 for (i=0; i < SO->N_Node; ++i) { in SUMA_Apply_VolReg_Trans()
1450 for (i=0; i < SO->N_Node; ++i) { in SUMA_Apply_VolReg_Trans()
2181 SO.NodeList = NodeList; SO.N_Node = N_Node; SO.VolPar = VolPar; SO.NodeDim = 3; in SUMA_vec_3dfind_to_3dmm()
2183 for (i=0; i < SO.N_Node; ++i) { in SUMA_vec_3dfind_to_3dmm()
2209 SO.NodeList = NodeList; SO.N_Node = N_Node; SO.VolPar = VolPar; SO.NodeDim = 3; in SUMA_vec_3dmm_to_3dfind()
2211 for (i=0; i < SO.N_Node; ++i) { in SUMA_vec_3dmm_to_3dfind()
2274 for (i=0; i < N_Node; ++i) { in SUMA_vec_3dmm_to_dicomm()
2304 for (i=0; i < N_Node; ++i) { in SUMA_vec_dicomm_to_3dmm()
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H A DSUMA_MiscFunc.h148 float *NodeList, int N_Node,
160 float *NodeList, int N_Node,
175 SUMA_EDGE_LIST * SUMA_Make_Edge_List (int *FaceSetList, int N_FaceSet, int N_Node, float *NodeList,…
176 SUMA_EDGE_LIST * SUMA_Make_Edge_List_eng (int *FaceSetList, int N_FaceSet, int N_Node, float *NodeL…
195 SUMA_EDGE_LIST *el, int N_Node,
198 float * SUMA_PolySurf3 (float *NodeList, int N_Node, int *FaceSetList, int N_FaceSet, int PolyDim, …
202 SUMA_SURFACE_CURVATURE * SUMA_Surface_Curvature (float *NodeList, int N_Node,
209 float * SUMA_Convexity (float *NodeList, int N_Node, float *NodeNormList,
211 float * SUMA_Convexity_Engine (float *NodeList, int N_Node, float *NodeNormList,
H A DSUMA_path_optimize.c845 Ci->N_Node = opt->N_sub; in SUMA_Apply_Deformation()
851 FuncName, Ci->N_Node, opt->N_sub); in SUMA_Apply_Deformation()
853 Ci->N_Node = opt->SO->N_Node; in SUMA_Apply_Deformation()
873 for (i = 0; i < Ci->N_Node; ++i) in SUMA_Apply_Deformation()
893 for (i = 0; i < 3*Ci->N_Node; ++i) { in SUMA_Apply_Deformation()
909 for (i = 0; i < Ci->N_Node; ++i) { in SUMA_Apply_Deformation()
921 for (i = 0; i < 3*Ci->N_Node; ++i) { in SUMA_Apply_Deformation()
1091 for(i = 0; i < Ci->N_Node; ++i) { in SUMA_Apply_Deformation()
1218 for (i = 0; i < Ci->N_Node; ++i) { in SUMA_Apply_Deformation()
1233 for (i = 0; i < Ci->N_Node; ++i) { in SUMA_Apply_Deformation()
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H A DSUMA_spharm.c291 sph_coord = SUMA_Cart2Sph (SO->NodeList, SO->N_Node, NULL ); in SUMA_SphericalCoordsUnitSphere()
299 theta = SUMA_NewMxVec(SUMA_double, 1, &(SO->N_Node), 1); in SUMA_SphericalCoordsUnitSphere()
306 phi = SUMA_NewMxVec(SUMA_double, 1, &(SO->N_Node), 1); in SUMA_SphericalCoordsUnitSphere()
313 for (i=0; i<SO->N_Node; ++i) { in SUMA_SphericalCoordsUnitSphere()
321 for (i=0; i<SO->N_Node; ++i) { in SUMA_SphericalCoordsUnitSphere()
334 for (i=0; i<SO->N_Node; ++i) { in SUMA_SphericalCoordsUnitSphere()
347 for (i=0; i<SO->N_Node; ++i) { in SUMA_SphericalCoordsUnitSphere()
360 for (i=0; i<SO->N_Node; ++i) { in SUMA_SphericalCoordsUnitSphere()
432 "#Domain has %d nodes.", l, opt->SOu->N_Node); in SUMA_Spherical_Bases()
H A DSUMA_SurfMatch.c261 N_inmask = SUMA_NodeDepth(SO->NodeList, SO->N_Node, prjdir, NULL, in main()
264 N_inmask = SO->N_Node; in main()
268 SOr->Label, SOr->N_Node, SO->Label, SO->N_Node, N_inmask); in main()
272 SUMA_AlignCoords(SO->NodeList, SO->N_Node, cmask, 1, SOr, Opt->s); in main()
H A DSUMA_compare_surfaces.c296 …if (!SO1->EL) SO1->EL = SUMA_Make_Edge_List (SO1->FaceSetList, SO1->N_FaceSet, SO1->N_Node,SO1->No… in main()
303 …if (!SO2->EL) SO2->EL = SUMA_Make_Edge_List (SO2->FaceSetList, SO2->N_FaceSet, SO2->N_Node, SO2->N… in main()
310 num_nodes1 = SO1->N_Node; in main()
311 num_nodes2 = SO2->N_Node; in main()
343 istop = SO1->N_Node-1; in main()
350 if (istart < 0 || istop > SO1->N_Node-1) { in main()
352 FuncName, onenode, SO1->N_Node-1); in main()
377 …triangle = SUMA_MT_intersect_triangle(P0,P1, SO2->NodeList, SO2->N_Node, SO2->FaceSetList, SO2->N_… in main()
/dports/science/afni/afni-AFNI_21.3.16/src/
H A Dsuma_afni_surface.c402 int * SUMA_Dijkstra_generic (int N_Node, in SUMA_Dijkstra_generic() argument
445 if ( Nx < 0 || Nx >= N_Node || in SUMA_Dijkstra_generic()
446 Ny < 0 || Ny >= N_Node ) { in SUMA_Dijkstra_generic()
449 , FuncName, Nx, Ny, N_Node); in SUMA_Dijkstra_generic()
478 sizeof(SUMA_DIJKSTRA_PATH_CHAIN) * N_Node); in SUMA_Dijkstra_generic()
488 L = (float *) SUMA_calloc (N_Node, sizeof (float)); in SUMA_Dijkstra_generic()
496 for (i=0; i < N_Node; ++i) { in SUMA_Dijkstra_generic()
518 SUMA_MIN_LOC_VEC(L, N_Node, Lmin, v); in SUMA_Dijkstra_generic()
598 L = (float *) SUMA_calloc (N_Node, sizeof (float)); in SUMA_Dijkstra_generic()
600 Lmins = (float *) SUMA_calloc (N_Node, sizeof (float)); in SUMA_Dijkstra_generic()
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