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Searched refs:PE_ALS_CONTAIN (Results 1 – 4 of 4) sorted by relevance

/dports/biology/bowtie2/bowtie2-2.4.4/
H A Dpe.cpp125 type = PE_ALS_CONTAIN; in peClassifyPair()
856 …int peExpects[] = { PE_ALS_NORMAL, PE_ALS_DISCORD, PE_ALS_OVERLAP, PE_ALS_CONTAIN, PE_ALS_DOVETAIL… in main()
886 …int peExpects[] = { PE_ALS_NORMAL, PE_ALS_DISCORD, PE_ALS_OVERLAP, PE_ALS_CONTAIN, PE_ALS_DOVETAIL… in main()
H A Dpe.h80 PE_ALS_CONTAIN, enumerator
/dports/biology/hisat2/hisat2-2.2.1/
H A Dpe.cpp126 type = PE_ALS_CONTAIN; in peClassifyPair()
857 …int peExpects[] = { PE_ALS_NORMAL, PE_ALS_DISCORD, PE_ALS_OVERLAP, PE_ALS_CONTAIN, PE_ALS_DOVETAIL… in main()
887 …int peExpects[] = { PE_ALS_NORMAL, PE_ALS_DISCORD, PE_ALS_OVERLAP, PE_ALS_CONTAIN, PE_ALS_DOVETAIL… in main()
H A Dpe.h80 PE_ALS_CONTAIN, enumerator