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Searched refs:PLL_ALIGN_END (Results 1 – 7 of 7) sorted by relevance

/dports/biology/iqtree/IQ-TREE-2.0.6/pll/
H A DevaluatePartialGenericSpecial.c672 e1[20] PLL_ALIGN_END, in computeVectorGTRGAMMAPROT()
673 e2[20] PLL_ALIGN_END, in computeVectorGTRGAMMAPROT()
674 d1[20] PLL_ALIGN_END, in computeVectorGTRGAMMAPROT()
675 d2[20] PLL_ALIGN_END; in computeVectorGTRGAMMAPROT()
821 e1[20] PLL_ALIGN_END, in computeVectorGTRGAMMA()
822 e2[20] PLL_ALIGN_END, in computeVectorGTRGAMMA()
823 d1[20] PLL_ALIGN_END, in computeVectorGTRGAMMA()
824 d2[20] PLL_ALIGN_END; in computeVectorGTRGAMMA()
931 myEI[400] PLL_ALIGN_END; in evaluatePartialGTRGAMMAPROT()
1011 myEI[16] PLL_ALIGN_END; in evaluatePartialGTRGAMMA()
H A DmakenewzGenericSpecial.c2822 diagptable0[8] PLL_ALIGN_END, in coreGTRGAMMA_BINARY()
2823 diagptable1[8] PLL_ALIGN_END, in coreGTRGAMMA_BINARY()
2824 diagptable2[8] PLL_ALIGN_END; in coreGTRGAMMA_BINARY()
2897 diagptable0[80] PLL_ALIGN_END, in coreGTRGAMMAPROT_LG4()
2898 diagptable1[80] PLL_ALIGN_END, in coreGTRGAMMAPROT_LG4()
2987 diagptable0[80] PLL_ALIGN_END, in coreGTRGAMMAPROT()
2988 diagptable1[80] PLL_ALIGN_END, in coreGTRGAMMAPROT()
2989 diagptable2[80] PLL_ALIGN_END; in coreGTRGAMMAPROT()
3067 e[20] PLL_ALIGN_END, in coreGTRCATPROT()
3068 s[20] PLL_ALIGN_END, in coreGTRCATPROT()
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H A DevaluateGenericSpecial.c2148 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRCAT_BINARY()
2196 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRGAMMA_BINARY()
2241 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRGAMMA_BINARY()
2860 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRCAT_SAVE()
2906 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRCAT_SAVE()
2989 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRGAMMA_GAPPED_SAVE()
3041 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRGAMMA_GAPPED_SAVE()
3123 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRGAMMA()
3170 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRGAMMA()
3239 PLL_ALIGN_BEGIN double t[2] PLL_ALIGN_END; in evaluateGTRCAT()
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H A DavxLikelihood.c127 umpX1[1024] PLL_ALIGN_END, in newviewGTRGAMMA_AVX()
128 umpX2[1024] PLL_ALIGN_END; in newviewGTRGAMMA_AVX()
201 umpX1[1024] PLL_ALIGN_END; in newviewGTRGAMMA_AVX()
404 umpX1[1024] PLL_ALIGN_END, in newviewGTRGAMMA_AVX_GAPPED_SAVE()
405 umpX2[1024] PLL_ALIGN_END; in newviewGTRGAMMA_AVX_GAPPED_SAVE()
516 umpX1[1024] PLL_ALIGN_END; in newviewGTRGAMMA_AVX_GAPPED_SAVE()
2232 umpX1[1840] PLL_ALIGN_END, in newviewGTRGAMMAPROT_AVX_LG4()
2233 umpX2[1840] PLL_ALIGN_END; in newviewGTRGAMMAPROT_AVX_LG4()
2343 ump_x2[20] PLL_ALIGN_END; in newviewGTRGAMMAPROT_AVX_LG4()
2839 ump_x2[20] PLL_ALIGN_END; in newviewGTRGAMMAPROT_AVX()
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H A Dpll.h91 #define PLL_ALIGN_END macro
94 #define PLL_ALIGN_END __attribute__((aligned(PLL_BYTE_ALIGNMENT)))
H A DnewviewGenericSpecial.c140 PLL_ALIGN_BEGIN const union PLL_ALIGN_END union
4294 maxima[2] PLL_ALIGN_END, in newviewGTRGAMMA_GAPPED_SAVE()
4295 EV_t[16] PLL_ALIGN_END; in newviewGTRGAMMA_GAPPED_SAVE()
4315 PLL_ALIGN_BEGIN double umpX1[256] PLL_ALIGN_END, umpX2[256] PLL_ALIGN_END; in newviewGTRGAMMA_GAPPED_SAVE()
4477 umpX1[256] PLL_ALIGN_END; in newviewGTRGAMMA_GAPPED_SAVE()
5211 maxima[2] PLL_ALIGN_END, in newviewGTRGAMMA()
5212 EV_t[16] PLL_ALIGN_END; in newviewGTRGAMMA()
5230 PLL_ALIGN_BEGIN double umpX1[256] PLL_ALIGN_END, umpX2[256] PLL_ALIGN_END; in newviewGTRGAMMA()
5338 PLL_ALIGN_BEGIN double umpX1[256] PLL_ALIGN_END; in newviewGTRGAMMA()
5728 EV_t[16] PLL_ALIGN_END; in newviewGTRCAT()
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H A DfastDNAparsimony.c165 PLL_ALIGN_BEGIN unsigned int counts[INTS_PER_VECTOR] PLL_ALIGN_END; in vectorPopcount()