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Searched refs:PLL_SECONDARY_DATA (Results 1 – 3 of 3) sorted by relevance

/dports/biology/iqtree/IQ-TREE-2.0.6/pll/
H A DoptimizeModel.c1191 case PLL_SECONDARY_DATA: in pllOptAlphasGeneric()
1239 case PLL_SECONDARY_DATA: in pllOptAlphasGeneric()
1704 case PLL_SECONDARY_DATA: in pllOptBaseFreqs()
1848 case PLL_SECONDARY_DATA: in pllOptRatesGeneric()
1885 case PLL_SECONDARY_DATA: in pllOptRatesGeneric()
H A Dpll.h246 #define PLL_SECONDARY_DATA 3 macro
H A Dmodels.c3508 case PLL_SECONDARY_DATA: in pllInitReversibleGTR()
3972 case PLL_SECONDARY_DATA: in initRateMatrix()
4020 assert(pr->partitionData[model]->dataType == PLL_SECONDARY_DATA || in initRateMatrix()
4066 if(partitions->partitionData[model]->dataType == PLL_SECONDARY_DATA || in setupSecondaryStructureSymmetries()