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Searched refs:PopcountWordsIntersect (Results 1 – 6 of 6) sorted by relevance

/dports/biology/plink/plink-ng-79b2df8c/2.0/include/
H A Dplink2_bits.h247 uintptr_t PopcountWordsIntersect(const uintptr_t* __restrict bitvec1_iter, const uintptr_t* __restr…
H A Dplink2_bits.cc517 uintptr_t PopcountWordsIntersect(const uintptr_t* __restrict bitvec1_iter, const uintptr_t* __restr… in PopcountWordsIntersect() function
987 uintptr_t PopcountWordsIntersect(const uintptr_t* __restrict bitvec1_iter, const uintptr_t* __restr… in PopcountWordsIntersect() function
H A Dpgenlib_read.cc7537 …*unphased_het_ctp = subsetted_het_ct - PopcountWordsIntersect(raw_phasepresent, sample_include, ra… in GetUnphasedBiallelicHetCt()
7937 …phased_hc_het_ct = raw_phasepresent_ct - PopcountWordsIntersect(raw_phasepresent, raw_dosage_prese…
8043 …phased_hc_het_ct = raw_phasepresent_ct - PopcountWordsIntersect(raw_phasepresent, raw_dosage_prese…
8713 … extra_phased_het_ct = PopcountWordsIntersect(raw_phasepresent, sample_include, raw_sample_ctl);
/dports/biology/plink/plink-ng-79b2df8c/2.0/
H A Dplink2_ld.cc1654 const uint32_t founder_male_ct = PopcountWordsIntersect(founder_info, sex_male, raw_sample_ctl); in LdPrune()
2008 nm_intersection_ct = PopcountWordsIntersect(nm_bitvec0, nm_bitvec1, sample_ctl); in HardcallPhasedR2Stats()
2746 nm_intersection_ct = PopcountWordsIntersect(nm_bitvec0, nm_bitvec1, sample_ctl); in DosagePhasedR2Prod()
3359 x_nosex_ct = founder_ct - PopcountWordsIntersect(founder_info, sex_nm, raw_sample_ctl); in LdConsole()
H A Dplink2_glm.cc901 …if (PopcountWordsIntersect(cur_sample_include, cur_covar_col->nonmiss, raw_sample_ctl) == prev_sam… in GlmDetermineCovars()
3999 case_allele_obs_ct -= PopcountWordsIntersect(pheno_cc_nm, male_nm, nm_sample_ctl); in GlmLogisticThread()
11945 …const uint32_t initial_case_ct = PopcountWordsIntersect(cur_sample_include, cur_pheno_col->data.cc… in GlmMain()
12016 … case_ct = PopcountWordsIntersect(cur_sample_include, cur_pheno_col->data.cc, raw_sample_ctl); in GlmMain()
12136 …const uint32_t case_ct_x = PopcountWordsIntersect(cur_sample_include_x, cur_pheno_col->data.cc, ra… in GlmMain()
12241 …const uint32_t case_ct_y = PopcountWordsIntersect(cur_sample_include_y, cur_pheno_col->data.cc, ra… in GlmMain()
H A Dplink2.cc1541 …const uint32_t obs_ct = PopcountWordsIntersect(pheno_cols[0].nonmiss, sample_include, raw_sample_c… in Plink2Core()
1543 …const uint32_t case_ct = PopcountWordsIntersect(pheno_cols[0].data.cc, sample_include, raw_sample_… in Plink2Core()
1900 … const uint32_t founder_knownsex_ct = PopcountWordsIntersect(founder_info, sex_nm, raw_sample_ctl); in Plink2Core()