Searched refs:RATEPRIOR (Results 1 – 5 of 5) sorted by relevance
/dports/biology/migrate/migrate-3.6.11/src/ |
H A D | menu.c | 2437 case RATEPRIOR: in set_proposal_menu() 2439 proposal = options->slice_sampling[RATEPRIOR]; in set_proposal_menu() 2499 case RATEPRIOR: in set_prior_menu() 2606 is_proposaltype(options->slice_sampling[RATEPRIOR])); in menuProposal() 2632 set_proposal_menu(RATEPRIOR, options); in menuProposal() 2663 is_priortype(options->bayesprior[RATEPRIOR])); in menuPrior() 2678 set_prior_menu(RATEPRIOR, options); in menuPrior() 3961 for(i=THETAPRIOR; i <= RATEPRIOR; i++) in set_proposal() 3963 if(without_rate && i==RATEPRIOR) in set_proposal() 3987 for(i=THETAPRIOR; i <= RATEPRIOR; i++) in set_prior() [all …]
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H A D | definitions.h | 189 #define RATEPRIOR 2 macro
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H A D | options.c | 831 is_proposaltype(options->slice_sampling[RATEPRIOR])); in print_options() 861 is_priortype(options->bayesprior[RATEPRIOR]), in print_options() 862 show_priormin(mytext1,options->bayespriorrate,options->bayesprior[RATEPRIOR]), in print_options() 864 show_priormax(mytext3,options->bayespriorrate,options->bayesprior[RATEPRIOR]), in print_options() 2733 show_proposaltype(options->slice_sampling[RATEPRIOR])); in print_parm_proposal() 2754 show_parmpriortype(options->bayesprior[RATEPRIOR]), mytext); in print_parm_prior() 3712 case 'R'/* RATE */: prior = options->bayespriorrate; ptype = RATEPRIOR; break; in set_bayes_options() 3816 case RATEPRIOR: in prior_consistency() 3871 options->bayesprior[RATEPRIOR] = priortype; in set_bayes_options_oldstyle() 5211 options->slice_sampling[RATEPRIOR] = TRUE; in numbercheck() [all …]
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H A D | bayes.c | 1645 type = RATEPRIOR; in bayes_update() 1646 if(world->options->slice_sampling[RATEPRIOR]) in bayes_update() 1672 if(type==RATEPRIOR) in bayes_update() 2238 which_rate_prior(options->bayesprior[RATEPRIOR]); in bayes_fill() 2254 select_prior_param(options->bayesprior[RATEPRIOR], world->numpop2, bayes, options->bayespriorrate); in bayes_fill()
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H A D | pretty.c | 3539 is_proposaltype(options->slice_sampling[RATEPRIOR])); in pdf_print_options() 3568 is_priortype(options->bayesprior[RATEPRIOR]), in pdf_print_options() 3569 show_priormin(mytext1, options->bayespriorrate,options->bayesprior[RATEPRIOR]), in pdf_print_options() 3570 show_priormean(mytext2, options->bayespriorrate,options->bayesprior[RATEPRIOR]), in pdf_print_options() 3571 show_priormax(mytext3, options->bayespriorrate,options->bayesprior[RATEPRIOR]), in pdf_print_options() 3572 show_priordelta(mytext4, options->bayespriorrate,options->bayesprior[RATEPRIOR]), in pdf_print_options() 3573 show_priorbins(mytext, options->bayespriorrate,options->bayesprior[RATEPRIOR])); in pdf_print_options()
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