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Searched refs:RATEPRIOR (Results 1 – 5 of 5) sorted by relevance

/dports/biology/migrate/migrate-3.6.11/src/
H A Dmenu.c2437 case RATEPRIOR: in set_proposal_menu()
2439 proposal = options->slice_sampling[RATEPRIOR]; in set_proposal_menu()
2499 case RATEPRIOR: in set_prior_menu()
2606 is_proposaltype(options->slice_sampling[RATEPRIOR])); in menuProposal()
2632 set_proposal_menu(RATEPRIOR, options); in menuProposal()
2663 is_priortype(options->bayesprior[RATEPRIOR])); in menuPrior()
2678 set_prior_menu(RATEPRIOR, options); in menuPrior()
3961 for(i=THETAPRIOR; i <= RATEPRIOR; i++) in set_proposal()
3963 if(without_rate && i==RATEPRIOR) in set_proposal()
3987 for(i=THETAPRIOR; i <= RATEPRIOR; i++) in set_prior()
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H A Ddefinitions.h189 #define RATEPRIOR 2 macro
H A Doptions.c831 is_proposaltype(options->slice_sampling[RATEPRIOR])); in print_options()
861 is_priortype(options->bayesprior[RATEPRIOR]), in print_options()
862 show_priormin(mytext1,options->bayespriorrate,options->bayesprior[RATEPRIOR]), in print_options()
864 show_priormax(mytext3,options->bayespriorrate,options->bayesprior[RATEPRIOR]), in print_options()
2733 show_proposaltype(options->slice_sampling[RATEPRIOR])); in print_parm_proposal()
2754 show_parmpriortype(options->bayesprior[RATEPRIOR]), mytext); in print_parm_prior()
3712 case 'R'/* RATE */: prior = options->bayespriorrate; ptype = RATEPRIOR; break; in set_bayes_options()
3816 case RATEPRIOR: in prior_consistency()
3871 options->bayesprior[RATEPRIOR] = priortype; in set_bayes_options_oldstyle()
5211 options->slice_sampling[RATEPRIOR] = TRUE; in numbercheck()
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H A Dbayes.c1645 type = RATEPRIOR; in bayes_update()
1646 if(world->options->slice_sampling[RATEPRIOR]) in bayes_update()
1672 if(type==RATEPRIOR) in bayes_update()
2238 which_rate_prior(options->bayesprior[RATEPRIOR]); in bayes_fill()
2254 select_prior_param(options->bayesprior[RATEPRIOR], world->numpop2, bayes, options->bayespriorrate); in bayes_fill()
H A Dpretty.c3539 is_proposaltype(options->slice_sampling[RATEPRIOR])); in pdf_print_options()
3568 is_priortype(options->bayesprior[RATEPRIOR]), in pdf_print_options()
3569 show_priormin(mytext1, options->bayespriorrate,options->bayesprior[RATEPRIOR]), in pdf_print_options()
3570 show_priormean(mytext2, options->bayespriorrate,options->bayesprior[RATEPRIOR]), in pdf_print_options()
3571 show_priormax(mytext3, options->bayespriorrate,options->bayesprior[RATEPRIOR]), in pdf_print_options()
3572 show_priordelta(mytext4, options->bayespriorrate,options->bayesprior[RATEPRIOR]), in pdf_print_options()
3573 show_priorbins(mytext, options->bayespriorrate,options->bayesprior[RATEPRIOR])); in pdf_print_options()