| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/ |
| H A D | seq_align_mapper.cpp | 225 !lrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
261 if (mrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
288 if (rrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
370 if (lrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
407 if (mrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
444 if (rrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
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| H A D | seq_map_switch.cpp | 161 match.same_strand = r1->SameStrand(*r2); in Add()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/ |
| H A D | seq_align_mapper.cpp | 225 !lrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
261 if (mrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
288 if (rrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
370 if (lrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
407 if (mrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
444 if (rrow.SameStrand(aln_row)) { in x_ConvertSegmentCvt()
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| H A D | seq_map_switch.cpp | 161 match.same_strand = r1->SameStrand(*r2); in Add()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objects/seq/ |
| H A D | seq_align_mapper_base.hpp | 74 bool SameStrand(const SAlignment_Row& r) const;
369 SameStrand(const SAlignment_Row& r) const in SameStrand() function in SAlignment_Segment::SAlignment_Row
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objects/seq/ |
| H A D | seq_align_mapper_base.hpp | 74 bool SameStrand(const SAlignment_Row& r) const;
369 SameStrand(const SAlignment_Row& r) const in SameStrand() function in SAlignment_Segment::SAlignment_Row
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objmgr/util/ |
| H A D | autodef_feature_clause_base.hpp | 68 virtual bool SameStrand(const CSeq_loc& loc) const;
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| H A D | autodef_feature_clause.hpp | 79 virtual bool SameStrand(const CSeq_loc& loc) const;
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objmgr/util/ |
| H A D | autodef_feature_clause_base.hpp | 68 virtual bool SameStrand(const CSeq_loc& loc) const;
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| H A D | autodef_feature_clause.hpp | 79 virtual bool SameStrand(const CSeq_loc& loc) const;
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/util/ |
| H A D | autodef_feature_clause.cpp | 1086 bool CAutoDefFeatureClause::SameStrand(const CSeq_loc& loc) const in SameStrand() function in CAutoDefFeatureClause
1168 if (mRNAClause == NULL || ! mRNAClause->SameStrand(*m_ClauseLocation)) { in AddmRNA()
1379 if (parent_clause->SameStrand(*m_ClauseLocation)) { in OkToGroupUnderByLocation()
1388 && parent_clause->SameStrand(*m_ClauseLocation)) { in OkToGroupUnderByLocation()
1400 && parent_clause->SameStrand(*m_ClauseLocation)) { in OkToGroupUnderByLocation()
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| H A D | autodef_feature_clause_base.cpp | 632 bool CAutoDefFeatureClause_Base::SameStrand(const CSeq_loc& loc) const in SameStrand() function in CAutoDefFeatureClause_Base
1677 if (parent_clause->SameStrand(*m_ClauseLocation)) { in OkToGroupUnderByLocation()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/util/ |
| H A D | autodef_feature_clause.cpp | 1086 bool CAutoDefFeatureClause::SameStrand(const CSeq_loc& loc) const in SameStrand() function in CAutoDefFeatureClause
1168 if (mRNAClause == NULL || ! mRNAClause->SameStrand(*m_ClauseLocation)) { in AddmRNA()
1379 if (parent_clause->SameStrand(*m_ClauseLocation)) { in OkToGroupUnderByLocation()
1388 && parent_clause->SameStrand(*m_ClauseLocation)) { in OkToGroupUnderByLocation()
1400 && parent_clause->SameStrand(*m_ClauseLocation)) { in OkToGroupUnderByLocation()
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| H A D | autodef_feature_clause_base.cpp | 632 bool CAutoDefFeatureClause_Base::SameStrand(const CSeq_loc& loc) const in SameStrand() function in CAutoDefFeatureClause_Base
1677 if (parent_clause->SameStrand(*m_ClauseLocation)) { in OkToGroupUnderByLocation()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objects/seq/ |
| H A D | seq_align_mapper_base.cpp | 1125 if (lrow.SameStrand(aln_row)) { in x_ConvertSegment()
1178 if (mrow.SameStrand(aln_row)) { in x_ConvertSegment()
1224 if (rrow.SameStrand(aln_row)) { in x_ConvertSegment()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objects/seq/ |
| H A D | seq_align_mapper_base.cpp | 1125 if (lrow.SameStrand(aln_row)) { in x_ConvertSegment()
1178 if (mrow.SameStrand(aln_row)) { in x_ConvertSegment()
1223 if (rrow.SameStrand(aln_row)) { in x_ConvertSegment()
|