| /dports/biology/ncbi-toolkit/ncbi/network/taxon1/common/ |
| H A D | taxutil.c | 489 vnp = SeqEntryGetSeqDescr(sep, Seq_descr_source, NULL); in CheckTaxId()
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| /dports/biology/ncbi-toolkit/ncbi/api/ |
| H A D | sequtil.h | 394 NLM_EXTERN ValNodePtr SeqEntryGetSeqDescr(SeqEntryPtr sep, Int2 type, ValNodePtr curr);
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| H A D | sequtil.c | 2306 NLM_EXTERN ValNodePtr SeqEntryGetSeqDescr (SeqEntryPtr sep, Int2 type, ValNodePtr curr) /* the l… in SeqEntryGetSeqDescr() function
2342 ptr = SeqEntryGetSeqDescr(sep, Seq_descr_title, NULL); in SeqEntryGetTitle()
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| H A D | sqnutil1.c | 15402 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in ResynchCDSPartials()
15537 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in ResynchMRNAPartials()
15629 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in ResynchPeptidePartials()
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| H A D | sqnutil4.c | 10353 ttl = SeqEntryGetSeqDescr (sep, Seq_descr_title, NULL); in ReplaceDefinitionLine()
11594 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_genbank, NULL); in GetKeywordPrefix()
11596 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in GetKeywordPrefix()
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| H A D | sqnutil3.c | 1612 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in MakeBioSourceCopy()
1641 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in ReplicatePopPhyMutSetBioSource()
24445 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in RetranslateOneCDS()
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| /dports/biology/ncbi-toolkit/ncbi/tools/ |
| H A D | toporg.c | 3362 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in RemoveBioSourceOnPopSet()
3380 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in RemoveBioSourceOnPopSet()
3397 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in RemoveBioSourceOnPopSet()
3426 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in RemoveMolInfoOnPopSet()
3439 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in RemoveMolInfoOnPopSet()
3486 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in NoBiosourceOrTaxonId()
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| /dports/biology/ncbi-toolkit/ncbi/sequin/ |
| H A D | sequin2.c | 990 if (SeqEntryGetSeqDescr (sep, Seq_descr_title, NULL) != NULL) { in FindFirstSeqEntryTitle()
6267 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in SetMoleculeAndMolTypeFromTitle()
7028 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_title, NULL); in ProcessOneNucleotideTitle()
7077 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in ProcessOneNucleotideTitle()
7271 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in PutMolInfoOnSeqEntry()
7837 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_title, NULL); in RemoveValueFromBioseq()
8003 sdp2 = SeqEntryGetSeqDescr (tmp, Seq_descr_source, NULL); in FuseNucProtBiosources()
13396 sdp = SeqEntryGetSeqDescr(sep, Seq_descr_title, NULL); in ReplaceAliasInAllDefinitionLines()
13412 sdp = SeqEntryGetSeqDescr(sep, Seq_descr_title, NULL); in ReplaceAliasInAllDefinitionLines()
13470 sdp = SeqEntryGetSeqDescr(sep, Seq_descr_title, NULL); in ReplaceMolNamesWithMolBracketsInDefinitionLines()
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| H A D | sequin4.c | 288 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in MoveSegSetMolInfo()
293 sdp = SeqEntryGetSeqDescr (partssep, Seq_descr_molinfo, NULL); in MoveSegSetMolInfo()
299 sdp = SeqEntryGetSeqDescr (tmp, Seq_descr_molinfo, NULL); in MoveSegSetMolInfo()
5251 vnp = SeqEntryGetSeqDescr (prot_sep, Seq_descr_molinfo, NULL); in SetExplodedProtein()
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| H A D | sequin7.c | 4598 ttl = SeqEntryGetSeqDescr (sep, Seq_descr_title, NULL); in FindAccInDefCallback()
4617 ttl = SeqEntryGetSeqDescr (sep, Seq_descr_title, ttl); in FindAccInDefCallback()
4684 if ((! force) && SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL) != NULL) return 0; in DoSeqEntryToAsn3()
5446 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_title, NULL); in AddOrgToDefElement()
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| H A D | sequin1.c | 8093 vnp = SeqEntryGetSeqDescr (top, Seq_descr_source, NULL); in CommonAddSeq()
8106 vnp = SeqEntryGetSeqDescr (nuc, Seq_descr_molinfo, NULL); in CommonAddSeq()
8135 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in CommonAddSeq()
8178 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in CommonAddSeq()
8272 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in CommonAddSeq()
16039 sdp = SeqEntryGetSeqDescr (list, Seq_descr_molinfo, NULL); in FinishOneSeqEntry()
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| H A D | sequin3.c | 1069 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_source, NULL); in DoFixupLocus()
12371 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in DoApplyMolInfo()
12462 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in CheckForExistingMolInfo()
14968 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in ReconnectCDSProc()
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| H A D | sequin6.c | 9396 ttl = SeqEntryGetSeqDescr (nsep, Seq_descr_title, NULL); in GetDataForOrganism()
9398 ttl = SeqEntryGetSeqDescr (sep, Seq_descr_title, NULL); in GetDataForOrganism()
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| H A D | sequin10.c | 7101 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_title, NULL); in AddPrefixesToOneDefLine()
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| H A D | sequin5.c | 907 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_genbank, NULL); in ConvertSeqIdListToLocalID()
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| /dports/biology/ncbi-toolkit/ncbi/desktop/ |
| H A D | cdrgn.c | 1090 sdp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in CdRegionPtrToForm()
4320 vnp = SeqEntryGetSeqDescr (sep, Seq_descr_molinfo, NULL); in CdRgnFeatFormActnProc()
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