Home
last modified time | relevance | path

Searched refs:TValue (Results 1 – 25 of 3533) sorted by relevance

12345678910>>...142

/dports/biology/seqan1/seqan-1.3.1/seqan/file/
H A Dstream.h48 template <typename TValue, typename TTraits>
53 template <typename TValue, typename TTraits>
58 template <typename TValue, typename TTraits>
63 template <typename TValue, typename TTraits>
68 template <typename TValue, typename TTraits>
73 template <typename TValue, typename TTraits>
78 template <typename TValue, typename TTraits>
245 _streamRead(TValue * target,
267 inline TValue
287 inline TValue
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/bs_tools/
H A Dbisar_score_data.h53 BsSubstitutionMatrix(TValue &fMeth, TValue &fBsConversion, TValue &seqIdentity, TValue &fN) in BsSubstitutionMatrix()
98 BsSubstitutionMatrix(TValue &fMeth, TValue &fBsConversion, TValue &seqIdentity, TValue &fN) in BsSubstitutionMatrix()
336 TValue fA;
337 TValue fC;
338 TValue fG;
339 TValue fT;
340 TValue fN;
392 TValue fA;
393 TValue fC;
394 TValue fG;
[all …]
/dports/biology/seqan1/seqan-1.3.1/seqan/basic/
H A Dbasic_holder.h85 typedef TValue Type;
90 typedef TValue * Type;
95 typedef TValue Type;
541 template <typename TValue> inline size_t length(TValue const * me);
542 template <typename TValue> inline size_t length(TValue * me);
849 TValue & value_)
862 TValue & value_)
875 TValue * & value_)
897 TValue * & value_)
1378 operator TValue &()
[all …]
H A Dbasic_alphabet_trait_basic.h61 template<typename TValue>
64 TValue * end_) in arrayConstruct()
95 TValue * end_, in arrayConstruct()
151 template<typename TValue>
161 template<typename TValue>
171 template<typename TValue>
185 template<typename TValue>
194 template<typename TValue>
197 TValue * end_, in _arrayDestructPointer()
203 template<typename TValue>
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/stream/
H A Dadapt_ios.h60 template <typename TValue, typename TTraits>
66 template <typename TValue, typename TTraits>
72 template <typename TValue, typename TTraits>
78 template <typename TValue, typename TTraits>
84 template <typename TValue, typename TTraits>
88 template <typename TValue, typename TTraits>
93 template <typename TValue, typename TTraits>
97 template <typename TValue, typename TTraits>
102 template <typename TValue, typename TTraits>
106 template <typename TValue, typename TTraits>
[all …]
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/stream/
H A Dadapt_ios.h60 template <typename TValue, typename TTraits>
66 template <typename TValue, typename TTraits>
72 template <typename TValue, typename TTraits>
78 template <typename TValue, typename TTraits>
84 template <typename TValue, typename TTraits>
88 template <typename TValue, typename TTraits>
93 template <typename TValue, typename TTraits>
97 template <typename TValue, typename TTraits>
102 template <typename TValue, typename TTraits>
106 template <typename TValue, typename TTraits>
[all …]
/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/stream/
H A Dadapt_ios.h60 template <typename TValue, typename TTraits>
66 template <typename TValue, typename TTraits>
72 template <typename TValue, typename TTraits>
78 template <typename TValue, typename TTraits>
84 template <typename TValue, typename TTraits>
88 template <typename TValue, typename TTraits>
93 template <typename TValue, typename TTraits>
97 template <typename TValue, typename TTraits>
102 template <typename TValue, typename TTraits>
106 template <typename TValue, typename TTraits>
[all …]
/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/align/
H A Ddp_matrix.h85 typedef unsigned int TValue; typedef
87 static const TValue VERTICAL = 0u;
89 static const TValue DIMENSION = 2u;
104 template <typename TValue>
105 class DPMatrix_<TValue, FullDPMatrix>
109 typedef Matrix<TValue, 2> THost;
227 typedef TValue Type;
233 typedef TValue const Type;
243 typedef TValue & Type;
249 typedef TValue const & Type;
[all …]
/dports/biology/seqan1/seqan-1.3.1/seqan/score/
H A Dscore_generated_forwards.h245 template <typename TValue, typename TSpec> inline TValue scoreGap(Score<TValue, TSpec> const & me);…
251 template <typename TValue> inline TValue scoreGapExtend(Score<TValue, EditDistance> &); // "…
252 template <typename TValue> inline TValue scoreGapExtend(Score<TValue, EditDistance> const &); …
272 template <typename TValue, typename TSpec> inline TValue scoreGapOpen(Score<TValue, TSpec> const & …
273 template <typename TValue> inline TValue scoreGapOpen(Score<TValue, EditDistance> &); // "se…
274 template <typename TValue> inline TValue scoreGapOpen(Score<TValue, EditDistance> const &); …
294 template <typename TValue, typename TSpec> inline TValue scoreMatch(Score<TValue, TSpec> const & me…
295 template <typename TValue> inline TValue scoreMatch(Score<TValue, EditDistance> &); // "seqa…
296 template <typename TValue> inline TValue scoreMatch(Score<TValue, EditDistance> const &); //…
302 template <typename TValue> inline TValue scoreMismatch(Score<TValue, EditDistance> &); // "s…
[all …]
H A Dscore_simple.h82 Score(TValue _match, TValue _mismatch, TValue _gap) in Score()
110 Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open) in Score()
144 inline TValue
165 setScoreMatch(Score<TValue, TSpec> & me, TValue const & value) { in setScoreMatch() argument
185 inline TValue
228 inline TValue
271 inline TValue
293 setScoreGapOpen(Score<TValue, TSpec> & me, TValue const & value) { in setScoreGapOpen() argument
317 inline TValue
339 setScoreGap(Score<TValue, TSpec> & me, TValue const & value) { in setScoreGap() argument
[all …]
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/basic/
H A Dholder_tristate.h58 template <typename TValue> inline size_t length(TValue const * me);
59 template <typename TValue> inline size_t length(TValue * me);
94 template <typename TValue>
172 template <typename TValue>
247 template <typename TValue>
318 template <typename TValue>
399 template <typename TValue>
405 template <typename TValue>
724 TValue & value_)
734 TValue & value_)
[all …]
H A Dtuple_bit_compressed.h46 template <typename TValue>
49 template <typename TValue>
91 template <typename TValue, unsigned SIZE>
92 struct Tuple<TValue, SIZE, BitPacked<> >
121 inline const TValue
211 inline TValue
222 TValue
284 move(Tuple<TValue, SIZE, BitPacked<> > & t1, Tuple<TValue, SIZE, BitPacked<> > & t2)
291 set(Tuple<TValue, SIZE, BitPacked<> > & t1, Tuple<TValue, SIZE, BitPacked<> > const & t2)
298 assign(Tuple<TValue, SIZE, BitPacked<> > & t1, Tuple<TValue, SIZE, BitPacked<> > const & t2)
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/basic/
H A Dholder_tristate.h58 template <typename TValue> inline size_t length(TValue const * me);
59 template <typename TValue> inline size_t length(TValue * me);
94 template <typename TValue>
172 template <typename TValue>
247 template <typename TValue>
318 template <typename TValue>
399 template <typename TValue>
405 template <typename TValue>
724 TValue & value_)
734 TValue & value_)
[all …]
H A Dtuple_bit_compressed.h46 template <typename TValue>
49 template <typename TValue>
91 template <typename TValue, unsigned SIZE>
92 struct Tuple<TValue, SIZE, BitPacked<> >
121 inline const TValue
211 inline TValue
222 TValue
284 move(Tuple<TValue, SIZE, BitPacked<> > & t1, Tuple<TValue, SIZE, BitPacked<> > & t2)
291 set(Tuple<TValue, SIZE, BitPacked<> > & t1, Tuple<TValue, SIZE, BitPacked<> > const & t2)
298 assign(Tuple<TValue, SIZE, BitPacked<> > & t1, Tuple<TValue, SIZE, BitPacked<> > const & t2)
[all …]
/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/basic/
H A Dholder_tristate.h54 template <typename TValue> inline size_t length(TValue const * me);
55 template <typename TValue> inline size_t length(TValue * me);
90 template <typename TValue>
176 template <typename TValue>
254 template <typename TValue>
332 template <typename TValue>
420 template <typename TValue>
426 template <typename TValue>
762 TValue & value_)
773 TValue & value_)
[all …]
H A Dtuple_bit_compressed.h46 template <typename TValue>
49 template <typename TValue>
93 template <typename TValue, unsigned SIZE>
94 struct Tuple<TValue, SIZE, BitPacked<> >
123 SEQAN_HOST_DEVICE inline const TValue
219 inline TValue
230 TValue
292 move(Tuple<TValue, SIZE, BitPacked<> > & t1, Tuple<TValue, SIZE, BitPacked<> > & t2)
299 set(Tuple<TValue, SIZE, BitPacked<> > & t1, Tuple<TValue, SIZE, BitPacked<> > const & t2)
306 assign(Tuple<TValue, SIZE, BitPacked<> > & t1, Tuple<TValue, SIZE, BitPacked<> > const & t2)
[all …]
/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/sequence/
H A Dadapt_std_list.h163 template<typename TValue>
173 template <typename TValue>
183 template<typename TValue>
186 end(std::list<TValue> & list,
193 template <typename TValue>
203 template <typename TValue>
211 template <typename TValue>
219 template <typename TValue>
227 template <typename TValue>
235 template <typename TValue>
[all …]
/dports/science/InsightToolkit/ITK-5.0.1/Modules/Core/Common/include/
H A DitkArray.hxx28 Array< TValue >
36 Array<TValue>
47 Array< TValue >
58 Array< TValue >
69 Array< TValue >
81 Array< TValue >
96 Array< TValue >
107 Array< TValue >
121 Array< TValue >
158 Array< TValue >
[all …]
/dports/lang/mono/mono-5.10.1.57/external/corefx/src/System.Collections.Immutable/src/System/Collections/Immutable/
H A DImmutableDictionary.cs25 public static ImmutableDictionary<TKey, TValue> Create<TKey, TValue>() in Create()
56 …atic ImmutableDictionary<TKey, TValue> Create<TKey, TValue>(IEqualityComparer<TKey> keyComparer, I… in Create()
70 …public static ImmutableDictionary<TKey, TValue> CreateRange<TKey, TValue>(IEnumerable<KeyValuePair… in CreateRange()
85 …tableDictionary<TKey, TValue> CreateRange<TKey, TValue>(IEqualityComparer<TKey> keyComparer, IEnum… in CreateRange()
101 …, TValue> CreateRange<TKey, TValue>(IEqualityComparer<TKey> keyComparer, IEqualityComparer<TValue>… in CreateRange()
113 public static ImmutableDictionary<TKey, TValue>.Builder CreateBuilder<TKey, TValue>() in CreateBuilder()
280 …static ImmutableDictionary<TKey, TValue> ToImmutableDictionary<TKey, TValue>(this IEnumerable<KeyV… in ToImmutableDictionary()
297 …public static bool Contains<TKey, TValue>(this IImmutableDictionary<TKey, TValue> map, TKey key, T… in Contains()
311 …public static TValue GetValueOrDefault<TKey, TValue>(this IImmutableDictionary<TKey, TValue> dicti… in GetValueOrDefault()
328 …public static TValue GetValueOrDefault<TKey, TValue>(this IImmutableDictionary<TKey, TValue> dicti… in GetValueOrDefault()
[all …]
/dports/biology/seqan1/seqan-1.3.1/seqan/index/
H A Dshape_base.h115 typedef TValue Type;
148 TValue leftChar;
327 me.hValue = me.hValue * ValueSize<TValue>::VALUE + ordValue((TValue)*it);
347 hash * ValueSize<TValue>::VALUE + ordValue((TValue)*it),
380 me.hValue = me.hValue * ValueSize<TValue>::VALUE + ordValue((TValue)*it);
399 TValue const,
410 TValue const,
419 typename TValue,
439 typename TValue,
483 me.hValue = me.hValue * ValueSize<TValue>::VALUE + ordValue((TValue)*it);
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/score/
H A Dscore_simple.h74 Score(TValue _match, TValue _mismatch, TValue _gap) in Score()
94 Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open) in Score()
122 inline TValue
139 setScoreMatch(Score<TValue, TSpec> & me, TValue const & value) { in setScoreMatch() argument
155 inline TValue
172 setScoreMismatch(Score<TValue, TSpec> & me, TValue const & value) { in setScoreMismatch() argument
188 inline TValue
221 inline TValue
239 setScoreGapOpen(Score<TValue, TSpec> & me, TValue const & value) { in setScoreGapOpen() argument
257 inline TValue
[all …]
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/score/
H A Dscore_simple.h74 Score(TValue _match, TValue _mismatch, TValue _gap) in Score()
94 Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open) in Score()
122 inline TValue
139 setScoreMatch(Score<TValue, TSpec> & me, TValue const & value) { in setScoreMatch() argument
155 inline TValue
172 setScoreMismatch(Score<TValue, TSpec> & me, TValue const & value) { in setScoreMismatch() argument
188 inline TValue
221 inline TValue
239 setScoreGapOpen(Score<TValue, TSpec> & me, TValue const & value) { in setScoreGapOpen() argument
257 inline TValue
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/sequence/
H A Dadapt_array_pointer.h192 begin(TValue * me,
210 begin(TValue * me,
228 end(TValue * me,
245 end(TValue * me,
260 inline TValue &
261 value(TValue * me,
316 TValue zero = TValue(0);
327 TValue const zero = TValue();
354 clear(TValue * me)
614 TValue * me,
[all …]
/dports/biology/seqan/seqan-library-2.4.0/include/seqan/sequence/
H A Dadapt_array_pointer.h192 begin(TValue * me,
210 begin(TValue * me,
228 end(TValue * me,
245 end(TValue * me,
260 inline TValue &
261 value(TValue * me,
316 TValue zero = TValue(0);
327 TValue const zero = TValue();
354 clear(TValue * me)
614 TValue * me,
[all …]
/dports/biology/seqan1/seqan-1.3.1/seqan/sequence/
H A Dadapt_std_list.h167 template<typename TValue>
177 template <typename TValue>
188 template<typename TValue>
191 end(std::list<TValue> & list,
198 template <typename TValue>
211 template <typename TValue>
219 template <typename TValue>
228 template <typename TValue>
236 template <typename TValue>
245 template <typename TValue>
[all …]

12345678910>>...142