| /dports/biology/phyml/phyml-3.3.20200621/src/ |
| H A D | mpi_boot.c | 412 strncat (s, tmp, T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
420 strncat (s, tmp, T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
422 strncat (s, "\n", T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
447 strncat (s, "\n", T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
472 strncat (s, "\n", T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
484 strncat (s, "\n", T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
490 strncat (s, tmp, T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
492 snprintf(tmp, T_MAX_LINE, "%d \t",tree->n_otu); strncat (s, tmp, T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
494 snprintf(tmp, T_MAX_LINE, "%.5f\t",tree->c_lnL); strncat (s, tmp, T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
505 snprintf(tmp, T_MAX_LINE, "%.3f \t",tree->mod->ras->pinvar->v); strncat (s, tmp, T_MAX_LINE); in Print_Fp_Out_Lines_MPI()
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| H A D | tiporder.c | 997 line = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in TIPO_Read_Taxa_Zscores()
999 if(!fgets(line,T_MAX_LINE,fp_coord)) in TIPO_Read_Taxa_Zscores()
1039 line = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in TIPO_Read_Taxa_Coordinates()
1041 if(!fgets(line,T_MAX_LINE,fp_coord)) in TIPO_Read_Taxa_Coordinates()
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| H A D | io.c | 595 s=(char *)mCalloc(T_MAX_LINE,sizeof(char)); in Write_Tree()
1309 line = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Read_Ntax_Len_Phylip()
1352 line = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Read_Seq_Sequential()
1730 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Print_Site_Lk()
2333 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Print_Fp_Out()
3658 line = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Read_Clade_Priors()
3659 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Read_Clade_Priors()
3669 if(!fgets(line,T_MAX_LINE,fp)) break; in Read_Clade_Priors()
6080 buff = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in PHYREX_Print_Tree_Structure()
6186 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in PHYREX_Input_Tree_Structure()
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| H A D | phyrex.c | 2910 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in PHYREX_Read_Tip_Coordinates()
3419 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in PHYREX_Print_MultiTypeTree_Config_File()
3424 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in PHYREX_Print_MultiTypeTree_Config_File()
3452 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in PHYREX_Print_MultiTypeTree_Config_File()
3457 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in PHYREX_Print_MultiTypeTree_Config_File()
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| H A D | utilities.c | 1230 long_line = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Add_Taxa_To_Constraint_Tree()
1238 if(i > T_MAX_LINE) assert(FALSE); in Add_Taxa_To_Constraint_Tree()
3352 if(!fgets(s,T_MAX_LINE,stdin)) Exit(""); in Getstring_Stdin()
4290 line = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Test_Multiple_Data_Set_Format()
4294 while(fgets(line,T_MAX_LINE,io->fp_in_tree)) if(strstr(line,";")) io->n_trees++; in Test_Multiple_Data_Set_Format()
8860 line = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Find_Root_Edge()
10982 line = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in Make_Empty_Alignment()
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| H A D | geo.c | 1757 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in GEO_Read_In_Landscape()
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| H A D | utilities.h | 269 #define T_MAX_LINE 2000000 macro
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| H A D | xml.c | 2527 val = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in XML_Update_XML_Struct_Given_Model_Params()
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| H A D | mixt.c | 3689 s = (char *)mCalloc(T_MAX_LINE,sizeof(char)); in MIXT_Print_Site_Lk()
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| H A D | mcmc.c | 6466 sizemax = T_MAX_LINE; in MCMC_Read_Param_Vals()
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| /dports/biology/seaview/seaview/csrc/ |
| H A D | phyml_util.h | 79 #define T_MAX_LINE 2000000 macro
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| H A D | phyml_util.c | 543 s=(char *)mCalloc(T_MAX_LINE,sizeof(char)); in Write_Tree()
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