/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | bitpack64-incr.c | 3165 add_00 (UINT4 *in, UINT4 increment) { in add_00() 3173 add_02_00 (UINT4 *in, UINT4 increment) { in add_02_00() 3179 add_02_01 (UINT4 *in, UINT4 increment) { in add_02_01() 3185 add_02_02 (UINT4 *in, UINT4 increment) { in add_02_02() 3191 add_02_03 (UINT4 *in, UINT4 increment) { in add_02_03() 3197 add_02_04 (UINT4 *in, UINT4 increment) { in add_02_04() 3203 add_02_05 (UINT4 *in, UINT4 increment) { in add_02_05() 3209 add_02_06 (UINT4 *in, UINT4 increment) { in add_02_06() 3215 add_02_07 (UINT4 *in, UINT4 increment) { in add_02_07() 3221 add_02_08 (UINT4 *in, UINT4 increment) { in add_02_08() [all …]
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H A D | bitpack64-access.c | 37 static UINT4 44 static UINT4 49 static UINT4 54 static UINT4 59 static UINT4 64 static UINT4 2074 UINT4 2119 UINT4 2162 UINT4 2253 extract_00 (UINT4 *out, const UINT4 *in) { in extract_00() [all …]
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H A D | bitpack64-incr.h | 7 extern UINT4 8 Bitpack64_incr (Oligospace_T oligo, UINT4 *ptrs, UINT4 *comp); 10 extern UINT4 11 Bitpack64_incr_bitpack (Oligospace_T oligo, int packsize, UINT4 *bitpack); 14 Bitpack64_add (Oligospace_T oligo, UINT4 *ptrs, UINT4 *comp, UINT4 increment); 17 Bitpack64_add_bitpack (Oligospace_T oligo, int packsize, UINT4 *bitpack, UINT4 increment); 21 Bitpack64_sub_bitpack (Oligospace_T oligo, int packsize, UINT4 *bitpack, UINT4 decrement); 24 extern UINT4 * 25 Bitpack64_realloc_one (int packsize, UINT4 *bitpack); 27 extern UINT4 * [all …]
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H A D | bitpack64-read.h | 12 extern UINT4 14 UINT4 *bitpackptrs, UINT4 *bitpackcomp); 17 Bitpack64_read_one_huge (Oligospace_T oligo, UINT4 *bitpackpages, 18 UINT4 *bitpackptrs, UINT4 *bitpackcomp); 21 Bitpack64_block_offsets (UINT4 *offsets, Oligospace_T oligo, 22 UINT4 *bitpackptrs, UINT4 *bitpackcomp); 28 UINT4 *bitpackpages, UINT4 *bitpackptrs, UINT4 *bitpackcomp); 32 Bitpack64_differential_packsize (Oligospace_T oligo, UINT4 *bitpackptrs);
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H A D | types.h | 19 typedef unsigned int UINT4; typedef 25 typedef UINT4 Genomecomp_T; 29 typedef UINT4 Localspace_T; 96 typedef UINT4 Offsetscomp_T; 104 typedef UINT4 Shortoligomer_T; 121 typedef UINT4 Positionsptr_T; 128 typedef UINT4 Positionsptr_T; 132 typedef UINT4 Positionsptr_T; 139 typedef UINT4 Trcoord_T; 151 typedef UINT4 Trieoffset_T; [all …]
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H A D | merge-diagonals-simd-uint4.c | 120 static UINT4 ** 131 combined = (UINT4 **) MALLOC(nstreams*sizeof(UINT4 *)); in make_diagonals_heap() 149 out = combined[ncombined] = (UINT4 *) MALLOC_ALIGN((total+1)*sizeof(UINT4)); in make_diagonals_heap() 172 heap = (UINT4 **) CALLOC((heapsize + 1),sizeof(UINT4 *)); in make_diagonals_heap() 228 UINT4 * 242 return (UINT4 *) NULL; in Merge_diagonals() 320 static UINT4 ** 331 combined = (UINT4 **) MALLOC(nstreams*sizeof(UINT4 *)); in make_univdiagonals_heap() 349 out = combined[ncombined] = (UINT4 *) MALLOC_ALIGN((total+1)*sizeof(UINT4)); in make_univdiagonals_heap() 368 heap = (UINT4 **) CALLOC((heapsize + 1),sizeof(UINT4 *)); in make_univdiagonals_heap() [all …]
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H A D | indexdb-write.c | 123 UINT4 *blockptr; 818 UINT4 *counts; in Indexdb_write_offsets_huge() 1197 UINT4 * 1206 UINT4 nvectors; in Indexdb_bitpack_counter() 1221 offsets = (UINT4 *) MALLOC((BLOCKSIZE + 1) * sizeof(UINT4)); in Indexdb_bitpack_counter() 1254 UINT4 * 1265 UINT4 k; in Indexdb_bitpack_counter_huge() 1906 UINT4 *offsetsmeta, UINT4 *offsetsstrm, UINT4 *countermeta, UINT4 *counterstrm, in compute_positions() 2177 UINT4 *offsetspages, UINT4 *offsetsmeta, UINT4 *offsetsstrm, in compute_positions_huge_offsets() 2178 UINT4 *countermeta, UINT4 *counterstrm, in compute_positions_huge_offsets() [all …]
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H A D | bitpack64-access.h | 8 extern UINT4 9 Bitpack64_access (Oligospace_T oligo, UINT4 *ptrs, UINT4 *comp); 11 extern UINT4 12 Bitpack64_access_bitpack (Oligospace_T oligo, int packsize, UINT4 *bitpack); 15 Bitpack64_access_filledp (Oligospace_T oligo, int packsize, UINT4 *bitpack); 18 Bitpack64_access_new_packsize (Oligospace_T oligo, int old_packsize, UINT4 *bitpack, int increment); 21 Bitpack64_extract_bitpack (UINT4 *out, int packsize, UINT4 *bitpack);
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H A D | cmetindex.c | 313 UINT4 *oldoffsetsmeta, UINT4 *oldoffsetsstrm, in index_offsets_ct_using_bitpack() 330 bitpacks = (UINT4 **) CALLOC(bmerspace,sizeof(UINT4 *)); in index_offsets_ct_using_bitpack() 362 UINT4 *oldoffsetsmeta, UINT4 *oldoffsetsstrm, in index_offsets_ga_using_bitpack() 379 bitpacks = (UINT4 **) CALLOC(bmerspace,sizeof(UINT4 *)); in index_offsets_ga_using_bitpack() 423 UINT4 *ptrs; 424 UINT4 ptri; 432 UINT4 *buffer; 450 buffer = (UINT4 *) CALLOC(buffer_size,sizeof(UINT4)); 585 UINT4 ptri; in sort_positions() 589 UINT4 *buffer; in sort_positions() [all …]
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H A D | atoiindex.c | 313 UINT4 *oldoffsetsmeta, UINT4 *oldoffsetsstrm, in index_offsets_ag_using_bitpack() 317 UINT4 **bitpacks; in index_offsets_ag_using_bitpack() 318 UINT4 increment; in index_offsets_ag_using_bitpack() 330 bitpacks = (UINT4 **) CALLOC(bmerspace,sizeof(UINT4 *)); in index_offsets_ag_using_bitpack() 362 UINT4 *oldoffsetsmeta, UINT4 *oldoffsetsstrm, in index_offsets_tc_using_bitpack() 366 UINT4 **bitpacks; in index_offsets_tc_using_bitpack() 367 UINT4 increment; in index_offsets_tc_using_bitpack() 379 bitpacks = (UINT4 **) CALLOC(bmerspace,sizeof(UINT4 *)); in index_offsets_tc_using_bitpack() 445 UINT4 ptri; in sort_positions() 449 UINT4 *buffer; in sort_positions() [all …]
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/dports/games/iortcw/iortcw-1.51c/MP/code/qcommon/ |
H A D | pbmd5.c | 55 typedef uint32_t UINT4; typedef 138 static void Transform( UINT4 *buf, UINT4 *in ) { in Transform() 236 mdContext->i[0] = mdContext->i[1] = (UINT4)0; in MD5Init() 247 UINT4 in[16]; in MD5Update() 258 mdContext->i[0] += ( (UINT4)inLen << 3 ); in MD5Update() 259 mdContext->i[1] += ( (UINT4)inLen >> 29 ); in MD5Update() 271 ( (UINT4)mdContext->in[ii] ); in MD5Update() 279 UINT4 in[16]; in MD5Final() 298 ( ( (UINT4)mdContext->in[ii + 2] ) << 16 ) | in MD5Final() 299 ( ( (UINT4)mdContext->in[ii + 1] ) << 8 ) | in MD5Final() [all …]
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/dports/devel/qmake/qt-x11-free-3.3.8/qmake/ |
H A D | qtmd5.cpp | 37 static inline UINT4 F(UINT4 x, UINT4 y, UINT4 z) in F() 42 static inline UINT4 G(UINT4 x, UINT4 y, UINT4 z) in G() 47 static inline UINT4 H(UINT4 x, UINT4 y, UINT4 z) in H() 52 static inline UINT4 I(UINT4 x, UINT4 y, UINT4 z) in I() 57 static inline UINT4 rotateLeft(UINT4 x, UINT4 n) in rotateLeft() 64 static inline void FF(UINT4 &a, UINT4 b, UINT4 c, UINT4 d, UINT4 x, UINT4 s, UINT4 ac) in FF() 71 static inline void GG(UINT4 &a, UINT4 b, UINT4 c, UINT4 d, UINT4 x, UINT4 s, UINT4 ac) in GG() 78 static inline void HH(UINT4 &a, UINT4 b, UINT4 c, UINT4 d, UINT4 x, UINT4 s, UINT4 ac) in HH() 85 static inline void II(UINT4 &a, UINT4 b, UINT4 c, UINT4 d, UINT4 x, UINT4 s, UINT4 ac) in II() 266 output[i] =((UINT4)input[j]) |(((UINT4)input[j+1]) << 8) | in Decode() [all …]
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/dports/www/squid_radius_auth/squid_radius_auth-1.10/ |
H A D | util.c | 92 static UINT4 ipstr2long(char *ip_str) in ipstr2long() 98 UINT4 ipaddr; in ipstr2long() 101 ipaddr = (UINT4)0; in ipstr2long() 108 return((UINT4)0); in ipstr2long() 114 return((UINT4)0); in ipstr2long() 119 return((UINT4)0); in ipstr2long() 122 ipaddr = ipaddr << 8 | (UINT4)cur_byte; in ipstr2long() 131 UINT4 get_ipaddr(char *host) in get_ipaddr() 139 return((UINT4)0); in get_ipaddr() 141 return(ntohl(*(UINT4 *)hp->h_addr)); in get_ipaddr()
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/dports/devel/sunpromake/schily-2021-09-18/cdda2wav/ |
H A D | scsi_cmds.h | 45 extern int ReadCddaMMC12 __PR((SCSI *scgp, UINT4 *p, 48 extern int ReadCddaMMC12_C2 __PR((SCSI *scgp, UINT4 *p, 54 extern int ReadCdda12 __PR((SCSI *scgp, UINT4 *p, 57 extern int ReadCdda12_C2 __PR((SCSI *scgp, UINT4 *p, 60 extern int ReadCdda10 __PR((SCSI *scgp, UINT4 *p, 63 extern int ReadStandard __PR((SCSI *scgp, UINT4 *p, 66 extern int ReadStandardData __PR((SCSI *scgp, UINT4 *p, 69 extern int ReadCddaFallbackMMC __PR((SCSI *scgp, UINT4 *p, 78 extern int ReadCddaSubSony __PR((SCSI *scgp, UINT4 *p, 81 extern int ReadCddaSub96Sony __PR((SCSI *scgp, UINT4 *p, [all …]
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/dports/devel/smake/schily-2021-09-18/cdda2wav/ |
H A D | scsi_cmds.h | 45 extern int ReadCddaMMC12 __PR((SCSI *scgp, UINT4 *p, 48 extern int ReadCddaMMC12_C2 __PR((SCSI *scgp, UINT4 *p, 54 extern int ReadCdda12 __PR((SCSI *scgp, UINT4 *p, 57 extern int ReadCdda12_C2 __PR((SCSI *scgp, UINT4 *p, 60 extern int ReadCdda10 __PR((SCSI *scgp, UINT4 *p, 63 extern int ReadStandard __PR((SCSI *scgp, UINT4 *p, 66 extern int ReadStandardData __PR((SCSI *scgp, UINT4 *p, 69 extern int ReadCddaFallbackMMC __PR((SCSI *scgp, UINT4 *p, 78 extern int ReadCddaSubSony __PR((SCSI *scgp, UINT4 *p, 81 extern int ReadCddaSub96Sony __PR((SCSI *scgp, UINT4 *p, [all …]
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/dports/devel/sccs/schily-2021-09-18/cdda2wav/ |
H A D | scsi_cmds.h | 45 extern int ReadCddaMMC12 __PR((SCSI *scgp, UINT4 *p, 48 extern int ReadCddaMMC12_C2 __PR((SCSI *scgp, UINT4 *p, 54 extern int ReadCdda12 __PR((SCSI *scgp, UINT4 *p, 57 extern int ReadCdda12_C2 __PR((SCSI *scgp, UINT4 *p, 60 extern int ReadCdda10 __PR((SCSI *scgp, UINT4 *p, 63 extern int ReadStandard __PR((SCSI *scgp, UINT4 *p, 66 extern int ReadStandardData __PR((SCSI *scgp, UINT4 *p, 69 extern int ReadCddaFallbackMMC __PR((SCSI *scgp, UINT4 *p, 78 extern int ReadCddaSubSony __PR((SCSI *scgp, UINT4 *p, 81 extern int ReadCddaSub96Sony __PR((SCSI *scgp, UINT4 *p, [all …]
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/dports/devel/schilybase/schily-2021-09-18/cdda2wav/ |
H A D | scsi_cmds.h | 45 extern int ReadCddaMMC12 __PR((SCSI *scgp, UINT4 *p, 48 extern int ReadCddaMMC12_C2 __PR((SCSI *scgp, UINT4 *p, 54 extern int ReadCdda12 __PR((SCSI *scgp, UINT4 *p, 57 extern int ReadCdda12_C2 __PR((SCSI *scgp, UINT4 *p, 60 extern int ReadCdda10 __PR((SCSI *scgp, UINT4 *p, 63 extern int ReadStandard __PR((SCSI *scgp, UINT4 *p, 66 extern int ReadStandardData __PR((SCSI *scgp, UINT4 *p, 69 extern int ReadCddaFallbackMMC __PR((SCSI *scgp, UINT4 *p, 78 extern int ReadCddaSubSony __PR((SCSI *scgp, UINT4 *p, 81 extern int ReadCddaSub96Sony __PR((SCSI *scgp, UINT4 *p, [all …]
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/dports/net/rscsi/schily-2021-09-18/cdda2wav/ |
H A D | scsi_cmds.h | 45 extern int ReadCddaMMC12 __PR((SCSI *scgp, UINT4 *p, 48 extern int ReadCddaMMC12_C2 __PR((SCSI *scgp, UINT4 *p, 54 extern int ReadCdda12 __PR((SCSI *scgp, UINT4 *p, 57 extern int ReadCdda12_C2 __PR((SCSI *scgp, UINT4 *p, 60 extern int ReadCdda10 __PR((SCSI *scgp, UINT4 *p, 63 extern int ReadStandard __PR((SCSI *scgp, UINT4 *p, 66 extern int ReadStandardData __PR((SCSI *scgp, UINT4 *p, 69 extern int ReadCddaFallbackMMC __PR((SCSI *scgp, UINT4 *p, 78 extern int ReadCddaSubSony __PR((SCSI *scgp, UINT4 *p, 81 extern int ReadCddaSub96Sony __PR((SCSI *scgp, UINT4 *p, [all …]
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/dports/archivers/star/schily-2021-09-18/cdda2wav/ |
H A D | scsi_cmds.h | 45 extern int ReadCddaMMC12 __PR((SCSI *scgp, UINT4 *p, 48 extern int ReadCddaMMC12_C2 __PR((SCSI *scgp, UINT4 *p, 54 extern int ReadCdda12 __PR((SCSI *scgp, UINT4 *p, 57 extern int ReadCdda12_C2 __PR((SCSI *scgp, UINT4 *p, 60 extern int ReadCdda10 __PR((SCSI *scgp, UINT4 *p, 63 extern int ReadStandard __PR((SCSI *scgp, UINT4 *p, 66 extern int ReadStandardData __PR((SCSI *scgp, UINT4 *p, 69 extern int ReadCddaFallbackMMC __PR((SCSI *scgp, UINT4 *p, 78 extern int ReadCddaSubSony __PR((SCSI *scgp, UINT4 *p, 81 extern int ReadCddaSub96Sony __PR((SCSI *scgp, UINT4 *p, [all …]
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/dports/sysutils/cdrtools/schily-2021-09-18/cdda2wav/ |
H A D | scsi_cmds.h | 45 extern int ReadCddaMMC12 __PR((SCSI *scgp, UINT4 *p, 48 extern int ReadCddaMMC12_C2 __PR((SCSI *scgp, UINT4 *p, 54 extern int ReadCdda12 __PR((SCSI *scgp, UINT4 *p, 57 extern int ReadCdda12_C2 __PR((SCSI *scgp, UINT4 *p, 60 extern int ReadCdda10 __PR((SCSI *scgp, UINT4 *p, 63 extern int ReadStandard __PR((SCSI *scgp, UINT4 *p, 66 extern int ReadStandardData __PR((SCSI *scgp, UINT4 *p, 69 extern int ReadCddaFallbackMMC __PR((SCSI *scgp, UINT4 *p, 78 extern int ReadCddaSubSony __PR((SCSI *scgp, UINT4 *p, 81 extern int ReadCddaSub96Sony __PR((SCSI *scgp, UINT4 *p, [all …]
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/dports/editors/ved/schily-2021-09-18/cdda2wav/ |
H A D | scsi_cmds.h | 45 extern int ReadCddaMMC12 __PR((SCSI *scgp, UINT4 *p, 48 extern int ReadCddaMMC12_C2 __PR((SCSI *scgp, UINT4 *p, 54 extern int ReadCdda12 __PR((SCSI *scgp, UINT4 *p, 57 extern int ReadCdda12_C2 __PR((SCSI *scgp, UINT4 *p, 60 extern int ReadCdda10 __PR((SCSI *scgp, UINT4 *p, 63 extern int ReadStandard __PR((SCSI *scgp, UINT4 *p, 66 extern int ReadStandardData __PR((SCSI *scgp, UINT4 *p, 69 extern int ReadCddaFallbackMMC __PR((SCSI *scgp, UINT4 *p, 78 extern int ReadCddaSubSony __PR((SCSI *scgp, UINT4 *p, 81 extern int ReadCddaSub96Sony __PR((SCSI *scgp, UINT4 *p, [all …]
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/dports/sysutils/schilyutils/schily-2021-09-18/cdda2wav/ |
H A D | scsi_cmds.h | 45 extern int ReadCddaMMC12 __PR((SCSI *scgp, UINT4 *p, 48 extern int ReadCddaMMC12_C2 __PR((SCSI *scgp, UINT4 *p, 54 extern int ReadCdda12 __PR((SCSI *scgp, UINT4 *p, 57 extern int ReadCdda12_C2 __PR((SCSI *scgp, UINT4 *p, 60 extern int ReadCdda10 __PR((SCSI *scgp, UINT4 *p, 63 extern int ReadStandard __PR((SCSI *scgp, UINT4 *p, 66 extern int ReadStandardData __PR((SCSI *scgp, UINT4 *p, 69 extern int ReadCddaFallbackMMC __PR((SCSI *scgp, UINT4 *p, 78 extern int ReadCddaSubSony __PR((SCSI *scgp, UINT4 *p, 81 extern int ReadCddaSub96Sony __PR((SCSI *scgp, UINT4 *p, [all …]
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/dports/mail/mairix/mairix-0.24/ |
H A D | md5.c | 54 static void Transform (UINT4 *, UINT4 *); 84 inline UINT4 ROTATE_LEFT(UINT4 x, int n) in ROTATE_LEFT() 127 mdContext->buf[0] = (UINT4)0x67452301; 128 mdContext->buf[1] = (UINT4)0xefcdab89; 129 mdContext->buf[2] = (UINT4)0x98badcfe; 130 mdContext->buf[3] = (UINT4)0x10325476; 142 UINT4 in[16]; 179 UINT4 in[16]; 200 ((UINT4)mdContext->in[ii]); 218 UINT4 *buf; in Transform() [all …]
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/dports/net/chrony/chrony-4.2/ |
H A D | md5.c | 54 static void Transform (UINT4 *, UINT4 *); 84 inline UINT4 ROTATE_LEFT(UINT4 x, int n) in ROTATE_LEFT() 127 mdContext->buf[0] = (UINT4)0x67452301; 128 mdContext->buf[1] = (UINT4)0xefcdab89; 129 mdContext->buf[2] = (UINT4)0x98badcfe; 130 mdContext->buf[3] = (UINT4)0x10325476; 142 UINT4 in[16]; 179 UINT4 in[16]; 200 ((UINT4)mdContext->in[ii]); 218 UINT4 *buf; in Transform() [all …]
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/dports/net/chrony-lite/chrony-4.2/ |
H A D | md5.c | 54 static void Transform (UINT4 *, UINT4 *); 84 inline UINT4 ROTATE_LEFT(UINT4 x, int n) in ROTATE_LEFT() 127 mdContext->buf[0] = (UINT4)0x67452301; 128 mdContext->buf[1] = (UINT4)0xefcdab89; 129 mdContext->buf[2] = (UINT4)0x98badcfe; 130 mdContext->buf[3] = (UINT4)0x10325476; 142 UINT4 in[16]; 179 UINT4 in[16]; 200 ((UINT4)mdContext->in[ii]); 218 UINT4 *buf; in Transform() [all …]
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