/dports/biology/ncbi-toolkit/ncbi/biostruc/newvast/ |
H A D | mkbioseq_vs.c | 65 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in NumberOfBioChains() 92 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in MakeBioGraphPtr() 133 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in NumberOfHetChains() 140 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_name)) in NumberOfHetChains() 164 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in MakeHetGraphPtr() 171 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_name); in MakeHetGraphPtr() 238 vnp = ValNodeFindNext(bsp->descr, NULL, BiostrucDescr_history); in MakeBioseqs() 261 vnp = ValNodeFindNext(pdb_entry, NULL, 1); in MakeBioseqs() 266 vnp = ValNodeFindNext(pdb_entry, NULL, 2); in MakeBioseqs() 462 if (vnp = ValNodeFindNext(rgp->descr, NULL, BiomolDescr_name)) in MakeBioseqs() [all …]
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H A D | mkbioseqA.c | 84 if (vnp = ValNodeFindNext(bsgp->descr, NULL, BiomolDescr_pdb_class)) in CreateSeqEntry() 87 if (vnp = ValNodeFindNext(bsgp->descr, NULL, BiomolDescr_name)) in CreateSeqEntry() 95 if (vnp = ValNodeFindNext(bsgp->descr, NULL, BiomolDescr_pdb_source)) in CreateSeqEntry() 106 if (vnp = ValNodeFindNext(bsmp->descr, NULL, ModelDescr_pdb_method)) in CreateSeqEntry() 148 if (tmp = ValNodeFindNext(bsmp->descr, NULL, ModelDescr_pdb_comment)) in CreateSeqEntry() 247 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_name)) in MakePDBId() 272 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_name)) in MakeLocalID() 320 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_organism)) in MakeBioseqDescr() 331 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_pdb_comment); in MakeBioseqDescr() 393 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type)) in MakeBioseqMol() [all …]
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H A D | vastchkid.c | 235 pbsdrThis = ValNodeFindNext(bsp->descr, NULL, BiostrucDescr_name); in AssignLocaIdToBiostruc() 247 pbmdrThis = ValNodeFindNext(pmgThis->descr, NULL, BiomolDescr_name); in AssignLocaIdToBiostruc()
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H A D | vastsrvDB.c | 1054 pbsidThis = ValNodeFindNext(basp2->id, NULL, BiostrucId_mmdb_id); in GetValidBiostrucAnnotSet() 1092 pbsidThis = ValNodeFindNext(pbsfs->descr, NULL, in MakeVppByVS()
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/dports/biology/ncbi-toolkit/ncbi/biostruc/ |
H A D | mkbioseq_vs.c | 62 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in NumberOfBioChains() 89 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in MakeBioGraphPtr() 130 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in NumberOfHetChains() 137 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_name)) in NumberOfHetChains() 161 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in MakeHetGraphPtr() 168 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_name); in MakeHetGraphPtr() 235 vnp = ValNodeFindNext(bsp->descr, NULL, BiostrucDescr_history); in MakeBioseqs() 258 vnp = ValNodeFindNext(pdb_entry, NULL, 1); in MakeBioseqs() 263 vnp = ValNodeFindNext(pdb_entry, NULL, 2); in MakeBioseqs() 459 if (vnp = ValNodeFindNext(rgp->descr, NULL, BiomolDescr_name)) in MakeBioseqs() [all …]
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H A D | mkbioseqA.c | 75 if (vnp = ValNodeFindNext(bsgp->descr, NULL, BiomolDescr_pdb_class)) in CreateSeqEntry() 78 if (vnp = ValNodeFindNext(bsgp->descr, NULL, BiomolDescr_name)) in CreateSeqEntry() 86 if (vnp = ValNodeFindNext(bsgp->descr, NULL, BiomolDescr_pdb_source)) in CreateSeqEntry() 97 if (vnp = ValNodeFindNext(bsmp->descr, NULL, ModelDescr_pdb_method)) in CreateSeqEntry() 139 if (tmp = ValNodeFindNext(bsmp->descr, NULL, ModelDescr_pdb_comment)) in CreateSeqEntry() 238 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_name)) in MakePDBId() 263 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_name)) in MakeLocalID() 311 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_organism)) in MakeBioseqDescr() 322 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_pdb_comment); in MakeBioseqDescr() 384 if (vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type)) in MakeBioseqMol() [all …]
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H A D | prunebsc.c | 106 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in MakeBioGraphPtr() 178 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_molecule_type); in MakeHetGraphPtr() 185 vnp = ValNodeFindNext(mgp->descr, NULL, BiomolDescr_name); in MakeHetGraphPtr() 559 if (vnp = ValNodeFindNext(currentbp->descr, NULL, BiomolDescr_name)) in PruneBiostruc() 574 if (vnp = ValNodeFindNext(het->descr, NULL, BiomolDescr_name)) in PruneBiostruc() 663 if (vnp = ValNodeFindNext(bsfsp->descr, NULL, BiostrucFeatureSetDescr_name)) in PruneBiostruc()
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H A D | mmdbapi1.c | 1964 pmdrThis = ValNodeFindNext(pbsmThis->descr, NULL, ModelDescr_name); in BiostrucModel2ModelStruc() 2878 pbsidThis = ValNodeFindNext(pbsasThis->id,NULL,BiostrucId_mmdb_id); in InstBSAnnotSet() 3194 pvnAlignment = ValNodeFindNext(pbsfSelected->Location_location,NULL, in fnPBSFtoPSA() 3898 pbsidThis = ValNodeFindNext(pcgaAlign->biostruc_ids,NULL,BiostrucId_mmdb_id); in InstallAlignedSlave() 4398 pvn = ValNodeFindNext(pvnSeqId, NULL, SEQID_GI); in FindGiSeq() 4524 pbsidThis = ValNodeFindNext(pbsBS->id,NULL,BiostrucId_mmdb_id); in Biostruc2Modelstruc() 4533 pbsdrThis = ValNodeFindNext(pbsBS->descr,NULL,BiostrucDescr_name); in Biostruc2Modelstruc() 4624 pbmdrThis = ValNodeFindNext(pmgThis->descr, NULL, BiomolDescr_name); in Biostruc2Modelstruc() 4639 pbmdrThis = ValNodeFindNext(pmgThis->descr, NULL, BiomolDescr_molecule_type); in Biostruc2Modelstruc() 4765 pbmdrThis = ValNodeFindNext(prgDict->descr, NULL, BiomolDescr_name); in Biostruc2Modelstruc() [all …]
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H A D | vastchkid.c | 232 pbsdrThis = ValNodeFindNext(bsp->descr, NULL, BiostrucDescr_name); in AssignLocaIdToBiostruc() 244 pbmdrThis = ValNodeFindNext(pmgThis->descr, NULL, BiomolDescr_name); in AssignLocaIdToBiostruc()
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H A D | vastsrv.c | 453 pvn = ValNodeFindNext(pbsf->Location_location,NULL,Location_location_alignment); in VastTableRows() 459 pbsidThis = ValNodeFindNext(pcga->biostruc_ids,NULL,BiostrucId_mmdb_id); in VastTableRows() 942 pbsidThis = ValNodeFindNext(pbsas->id,NULL,BiostrucId_mmdb_id); in MakeVastTable() 963 pbsidThis = ValNodeFindNext(pbsfs->descr,NULL,BiostrucFeatureSetDescr_name); in MakeVastTable()
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H A D | mmdbapi3.c | 652 pbsdrThis = ValNodeFindNext(pbsThis->descr,pbsdrLast,BiostrucDescr_attribution); in AuthorListPDB() 671 pbsdrThis = ValNodeFindNext(pbsThis->descr,pbsdrLast,BiostrucDescr_attribution); in AuthorListPDB() 695 pvnThis = ValNodeFindNext(pmsdThis->pbsBS->descr,NULL,BiostrucDescr_history); in WritePDBHeader() 1412 pbsdrThis = ValNodeFindNext(pmsdThis->pbsBS->descr, in WritePDBRemarks() 1428 pbsdrThis = ValNodeFindNext(pmsdThis->pbsBS->descr,pbsdrLast, in WritePDBRemarks() 1898 pvnThis = ValNodeFindNext(pmsdThis->pbsBS->descr,NULL,BiostrucDescr_history); in WriteKinHeader() 3337 pvnThis = ValNodeFindNext(pmsdThis->pbsBS->descr,NULL,BiostrucDescr_history); in WriteStrucHTMLHeader()
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H A D | mmdbapi.c | 566 ValNodeFindNext(pmmdbapi->pvnsffHead, NULL, iCode); in DoesFeatureTypeHaveFuncs()
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H A D | vast2mage.c | 147 pvnThis = ValNodeFindNext(pmsdThis->pbsBS->descr,NULL,BiostrucDescr_history); in AlignKinHeader()
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H A D | mmdbsrv.c | 695 pvnThis = ValNodeFindNext(pmsdThis->pbsBS->descr,NULL,BiostrucDescr_history); in PrintStructureInfo() 751 pvnThis = ValNodeFindNext(pmsdThis->pGraphDescr,NULL,BiomolDescr_pdb_comment); in PrintStructureInfo()
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H A D | mmdbapi4.c | 531 pmdrThis = ValNodeFindNext(pbsmThis->descr, NULL, ModelDescr_name); in RefreshModelAsnMem() 1793 pvn = ValNodeFindNext (feature->Location_location, NULL, Location_location_alignment); in BiostrucAnnotSetToSeqAnnot()
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H A D | mmdbapi2.c | 1479 pvnalThis = ValNodeFindNext(pmadThis->pvnalLocate, NULL, iModel); in GetAtomLocs()
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/dports/biology/ncbi-toolkit/ncbi/biostruc/newVSch/ |
H A D | SendSummary.cpp | 371 =ValNodeFindNext(pmsdThis->pbsBS->descr,NULL,BiostrucDescr_history); in SendSummaryPageText()
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H A D | vastsrv_comb.cpp | 1077 pbsidThis = ValNodeFindNext(basp2->id, NULL, BiostrucId_mmdb_id); in GetValidBiostrucAnnotSet() 1116 pbsidThis = ValNodeFindNext(pbsfs->descr, NULL, in MakeVppByVS()
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/dports/biology/ncbi-toolkit/ncbi/corelib/ |
H A D | ncbimisc.h | 223 NLM_EXTERN ValNodePtr LIBCALL ValNodeFindNext PROTO((ValNodePtr head, ValNodePtr curr, Nlm_Int2 ch…
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H A D | ncbimisc.c | 939 NLM_EXTERN ValNodePtr LIBCALL ValNodeFindNext (ValNodePtr head, ValNodePtr curr, Nlm_Int2 choice) in ValNodeFindNext() function
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/dports/biology/ncbi-toolkit/ncbi/biostruc/newmmdb/ |
H A D | mmdbsrv.c | 567 pvnThis =ValNodeFindNext(pmsdThis->pbsBS->descr,NULL,BiostrucDescr_history); in PrintStrucInfoNew() 588 pvnThis =ValNodeFindNext(pmsdThis->pGraphDescr,NULL,BiomolDescr_pdb_comment); in PrintStrucInfoNew()
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/dports/biology/ncbi-toolkit/ncbi/api/ |
H A D | samutil.c | 902 pValNode = ValNodeFindNext(pParaG->ptxtList, pParaG->ptxtList, 0); in DDE_ParaGNew() 907 pValNode = ValNodeFindNext(pParaG->ptxtList, pValNode, 0); in DDE_ParaGNew() 994 pValNode = ValNodeFindNext(pPopList->RulerDescr, pPopList->RulerDescr, 0); in DDE_PopListNew() 1001 pValNode = ValNodeFindNext(pPopList->RulerDescr, pValNode, 0); in DDE_PopListNew()
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/dports/biology/ncbi-toolkit/ncbi/cn3d/ |
H A D | cn3dopen.c | 637 ValNodeFindNext(pbsfThis->Location_location, NULL, in fnMarkAlignedResidues()
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/dports/biology/ncbi-toolkit/ncbi/desktop/ |
H A D | pubdesc.c | 1959 vnp = ValNodeFindNext (pdp->pub, NULL, PUB_Muid); in LookupCommonProc() 1960 if (vnp != NULL && ValNodeFindNext (pdp->pub, NULL, PUB_PMid) != NULL) { in LookupCommonProc() 1964 vnp = ValNodeFindNext (pdp->pub, NULL, PUB_PMid); in LookupCommonProc() 1965 if (vnp != NULL && ValNodeFindNext (pdp->pub, NULL, PUB_Muid) != NULL) { in LookupCommonProc()
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/dports/biology/ncbi-toolkit/ncbi/sequin/ |
H A D | sequin7.c | 1151 vnp = ValNodeFindNext (prot->descr, NULL, Seq_descr_title); in AskForInterval() 1224 vnp = ValNodeFindNext (pbsp->descr, NULL, Seq_descr_title); in AutomaticProteinProcess()
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