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Searched refs:XtXWz (Results 1 – 3 of 3) sorted by relevance

/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dvc.h115 const gsl_matrix *XWz, size_t ns_test, gsl_matrix *XtXWz);
118 const gsl_matrix *XWz, size_t ns_test, gsl_matrix *XtXWz);
122 gsl_matrix *XtXWz);
125 const gsl_matrix *XtXWz, const gsl_matrix *S_mat,
H A Dvc.cpp2479 const gsl_matrix *XWz, size_t ns_test, gsl_matrix *XtXWz) { in BimbamXtXwz() argument
2550 gsl_matrix_set(XtXWz, ns_test, i, d / sqrt(geno_var)); in BimbamXtXwz()
2570 const gsl_matrix *XWz, size_t ns_test, gsl_matrix *XtXWz) { in PlinkXtXwz() argument
2675 gsl_matrix_set(XtXWz, ns_test, i, d / sqrt(geno_var)); in PlinkXtXwz()
2694 gsl_matrix *XtXWz) { in MFILEXtXwz() argument
2696 gsl_matrix_set_zero(XtXWz); in MFILEXtXwz()
2711 ns_test, XtXWz); in MFILEXtXwz()
2714 XWz, ns_test, XtXWz); in MFILEXtXwz()
2728 const gsl_matrix *XtXWz, const gsl_matrix *S_mat, in CalcCIss() argument
2799 gsl_vector_const_view XtXWz_col1 = gsl_matrix_const_column(XtXWz, i); in CalcCIss()
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H A Dgemma.cpp2426 gsl_matrix *XtXWz = in BatchRun() local
2516 gsl_matrix_set_zero(XtXWz); in BatchRun()
2521 XWz, 0, XtXWz); in BatchRun()
2524 cPar.indicator_snp, XWz, 0, XtXWz); in BatchRun()
2527 cPar.mindicator_snp, XWz, XtXWz); in BatchRun()
2530 cPar.mindicator_snp, XWz, XtXWz); in BatchRun()
2533 CalcCIss(Xz, XWz, XtXWz, S, Svar, w, z, s_vec, vec_cat, cPar.v_pve, in BatchRun()
2544 gsl_matrix_safe_free(XtXWz); in BatchRun()