Searched refs:XtXWz (Results 1 – 3 of 3) sorted by relevance
/dports/biology/gemma/GEMMA-0.98.3/src/ |
H A D | vc.h | 115 const gsl_matrix *XWz, size_t ns_test, gsl_matrix *XtXWz); 118 const gsl_matrix *XWz, size_t ns_test, gsl_matrix *XtXWz); 122 gsl_matrix *XtXWz); 125 const gsl_matrix *XtXWz, const gsl_matrix *S_mat,
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H A D | vc.cpp | 2479 const gsl_matrix *XWz, size_t ns_test, gsl_matrix *XtXWz) { in BimbamXtXwz() argument 2550 gsl_matrix_set(XtXWz, ns_test, i, d / sqrt(geno_var)); in BimbamXtXwz() 2570 const gsl_matrix *XWz, size_t ns_test, gsl_matrix *XtXWz) { in PlinkXtXwz() argument 2675 gsl_matrix_set(XtXWz, ns_test, i, d / sqrt(geno_var)); in PlinkXtXwz() 2694 gsl_matrix *XtXWz) { in MFILEXtXwz() argument 2696 gsl_matrix_set_zero(XtXWz); in MFILEXtXwz() 2711 ns_test, XtXWz); in MFILEXtXwz() 2714 XWz, ns_test, XtXWz); in MFILEXtXwz() 2728 const gsl_matrix *XtXWz, const gsl_matrix *S_mat, in CalcCIss() argument 2799 gsl_vector_const_view XtXWz_col1 = gsl_matrix_const_column(XtXWz, i); in CalcCIss() [all …]
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H A D | gemma.cpp | 2426 gsl_matrix *XtXWz = in BatchRun() local 2516 gsl_matrix_set_zero(XtXWz); in BatchRun() 2521 XWz, 0, XtXWz); in BatchRun() 2524 cPar.indicator_snp, XWz, 0, XtXWz); in BatchRun() 2527 cPar.mindicator_snp, XWz, XtXWz); in BatchRun() 2530 cPar.mindicator_snp, XWz, XtXWz); in BatchRun() 2533 CalcCIss(Xz, XWz, XtXWz, S, Svar, w, z, s_vec, vec_cat, cPar.v_pve, in BatchRun() 2544 gsl_matrix_safe_free(XtXWz); in BatchRun()
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