| /dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/score/ |
| H A D | score_matrix.h | 113 Score(TValue _gap_extend, TValue _gap_open) in Score() argument
114 : data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
125 Score(char const * filename, TValue _gap_extend, TValue _gap_open) in Score() argument
126 : data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
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| H A D | score_simple.h | 96 Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open) in Score() argument
98 data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/score/ |
| H A D | score_matrix.h | 112 Score(TValue _gap_extend, TValue _gap_open) in Score() argument
113 : data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
122 Score(char const * filename, TValue _gap_extend, TValue _gap_open) in Score() argument
123 : data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
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| H A D | score_simple.h | 94 Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open) in Score() argument
96 data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
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| H A D | score_matrix_dyn.h | 149 Score(TValue _gap_extend, TValue _gap_open) : in Score() argument
150 TBaseScore(_gap_extend, _gap_open) in Score()
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| /dports/biology/seqan/seqan-library-2.4.0/include/seqan/score/ |
| H A D | score_matrix.h | 112 Score(TValue _gap_extend, TValue _gap_open) in Score() argument
113 : data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
122 Score(char const * filename, TValue _gap_extend, TValue _gap_open) in Score() argument
123 : data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
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| H A D | score_simple.h | 94 Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open) in Score() argument
96 data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
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| H A D | score_matrix_dyn.h | 149 Score(TValue _gap_extend, TValue _gap_open) : in Score() argument
150 TBaseScore(_gap_extend, _gap_open) in Score()
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| /dports/biology/seqan1/seqan-1.3.1/seqan/score/ |
| H A D | score_simple.h | 110 Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open) in Score() argument
112 data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
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| H A D | score_matrix.h | 115 Score(TValue _gap_extend, TValue _gap_open) in Score() argument
116 : data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
140 Score(TString const & filename, TValue _gap_extend, TValue _gap_open) in Score() argument
141 : data_gap_extend(_gap_extend), data_gap_open(_gap_open) { in Score()
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/micro_razers/ |
| H A D | outputFormat.h | 69 …Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open, TQualityString const … in Score() argument
73 data_gap_open(_gap_open), in Score()
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| /dports/biology/seqan1/seqan-1.3.1/apps/razers/ |
| H A D | outputFormat.h | 69 …Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open, TQualityString const … in Score() argument
73 data_gap_open(_gap_open), in Score()
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| /dports/biology/seqan1/seqan-1.3.1/apps/razers2/ |
| H A D | outputFormat.h | 69 …Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open, TQualityString const … in Score() argument
73 data_gap_open(_gap_open), in Score()
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers/ |
| H A D | outputFormat.h | 69 …Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open, TQualityString const … in Score() argument
73 data_gap_open(_gap_open), in Score()
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers3/ |
| H A D | outputFormat.h | 71 …Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open, TQualityString const … in Score() argument
75 data_gap_open(_gap_open), in Score()
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| /dports/biology/seqan1/seqan-1.3.1/apps/splazers/ |
| H A D | outputFormat.h | 69 …Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open, TQualityString const … in Score() argument
73 data_gap_open(_gap_open), in Score()
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/splazers/ |
| H A D | outputFormat.h | 69 …Score(TValue _match, TValue _mismatch, TValue _gap_extend, TValue _gap_open, TQualityString const … in Score() argument
73 data_gap_open(_gap_open), in Score()
|