Searched refs:adj_grm_fac (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/gcta/gcta_1.26.0_src/ |
| H A D | bivar_reml.cpp | 15 …ile, string sex_file, int mphen, int mphen2, double grm_cutoff, double adj_grm_fac, int dosage_com… in fit_bivar_reml() argument
35 read_grm(grm_file, grm_id, true, false, !(adj_grm_fac > -1.0)); in fit_bivar_reml()
42 read_grm(grm_files[i], grm_id, false, true, !(adj_grm_fac > -1.0)); in fit_bivar_reml()
61 if (adj_grm_fac>-1.0) adj_grm(adj_grm_fac); in fit_bivar_reml()
189 read_grm(grm_files[k], grm_id, true, false, !(adj_grm_fac > -1.0)); in fit_bivar_reml()
190 if (adj_grm_fac>-1.0) adj_grm(adj_grm_fac); in fit_bivar_reml()
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| H A D | grm.cpp | 427 void gcta::adj_grm(double adj_grm_fac) { in adj_grm() argument
448 d_buf = 1.0 - (adj_grm_fac + 1.0 / _grm_N(_keep[i], _keep[i])) / diag_var; in adj_grm()
451 …if (_grm_N(_keep[i], _keep[j]) > 0) _grm(_keep[i], _keep[j]) *= 1.0 - (adj_grm_fac + 1.0 / _grm_N(… in adj_grm()
480 …e, string remove_indi_file, string sex_file, double grm_cutoff, double adj_grm_fac, int dosage_com… in manipulate_grm() argument
492 if (adj_grm_fac>-1.0) adj_grm(adj_grm_fac); in manipulate_grm()
509 …e, string remove_indi_file, string sex_file, double grm_cutoff, double adj_grm_fac, int dosage_com… in save_grm() argument
511 …manipulate_grm(grm_file, keep_indi_file, remove_indi_file, sex_file, grm_cutoff, adj_grm_fac, dosa… in save_grm()
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| H A D | gcta.h | 101 …e, string remove_indi_file, string sex_file, double grm_cutoff, double adj_grm_fac, int dosage_com…
109 …emove_indi_file, string sex_file, int mphen, double grm_cutoff, double adj_grm_fac, int dosage_com…
120 …ile, string sex_file, int mphen, int mphen2, double grm_cutoff, double adj_grm_fac, int dosage_com…
226 void adj_grm(double adj_grm_fac);
228 …e, string remove_indi_file, string sex_file, double grm_cutoff, double adj_grm_fac, int dosage_com…
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| H A D | est_hsq.cpp | 171 …emove_indi_file, string sex_file, int mphen, double grm_cutoff, double adj_grm_fac, int dosage_com… in fit_reml() argument
191 read_grm(grm_file, grm_id, true, false, !(adj_grm_fac > -1.0)); in fit_reml()
198 read_grm(grm_files[i], grm_id, false, true, !(adj_grm_fac > -1.0)); in fit_reml()
227 if (adj_grm_fac>-1.0) adj_grm(adj_grm_fac); in fit_reml()
302 read_grm(grm_files[i], grm_id, true, false, !(adj_grm_fac > -1.0)); in fit_reml()
303 if (adj_grm_fac>-1.0) adj_grm(adj_grm_fac); in fit_reml()
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