Searched refs:alenA (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/infernal/infernal-1.1.3/easel/miniapps/ |
| H A D | esl-alimerge.c | 108 …int64_t *alenA = NULL; /* [0..nali_tot-1] alignment length of input msas (ev… in main() local
258 ESL_ALLOC(alenA, sizeof(int64_t) * nalloc); in main()
314 …alenA[ai] = msaA[ai]->alen; /* impt if --small and --rfonly, to remember total width of aln to exp… in main()
322 ESL_RALLOC(alenA, tmp, sizeof(int64_t) * nalloc); in main()
457 …alenA[ai], /* alignment length, as we read it in first pass (inserts may have been removed since t… in main()
501 …alenA[ai], /* alignment length, as we read it in first pass (inserts may have been removed since t… in main()
563 if(alenA != NULL) free(alenA); in main()
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| /dports/biology/hmmer/hmmer-3.3/easel/miniapps/ |
| H A D | esl-alimerge.c | 108 …int64_t *alenA = NULL; /* [0..nali_tot-1] alignment length of input msas (ev… in main() local
258 ESL_ALLOC(alenA, sizeof(int64_t) * nalloc); in main()
314 …alenA[ai] = msaA[ai]->alen; /* impt if --small and --rfonly, to remember total width of aln to exp… in main()
322 ESL_RALLOC(alenA, tmp, sizeof(int64_t) * nalloc); in main()
457 …alenA[ai], /* alignment length, as we read it in first pass (inserts may have been removed since t… in main()
501 …alenA[ai], /* alignment length, as we read it in first pass (inserts may have been removed since t… in main()
563 if(alenA != NULL) free(alenA); in main()
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| /dports/biology/infernal/infernal-1.1.3/src/ |
| H A D | cmalign.c | 2075 …int64_t *alenA = NULL; /* [0..nali_tot-1] alignment length of input msas (ev… in create_and_output_final_msa() local
2104 ESL_ALLOC(alenA, sizeof(int64_t) * nali); in create_and_output_final_msa()
2141 alenA[ai] = alen_cur; /* to remember total width of aln to expect in second pass */ in create_and_output_final_msa()
2193 …alenA[ai], /* alignment length, as we read it in first pass (inserts may have been removed since t… in create_and_output_final_msa()
2229 alenA[ai], /* alignment length, as we read it in first pass, not strictly necessary */ in create_and_output_final_msa()
2260 if(alenA != NULL) free(alenA); in create_and_output_final_msa()
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