Searched refs:alignIntervals (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/seqan1/seqan-1.3.1/apps/insegt/ |
| H A D | overlap_module.h | 34 …ore<TSpec, TConfig> & me, TIntervalTree & intervalTree, TIntervals & alignIntervals, unsigned offs… in getIdsForRead() argument
48 resize(ids, length(alignIntervals)); in getIdsForRead()
50 TIntervalIter itI = begin(alignIntervals); in getIdsForRead()
51 TIntervalIter itIEnd = end(alignIntervals); in getIdsForRead()
62 itI = begin(alignIntervals); in getIdsForRead()
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/insegt/ |
| H A D | overlap_module.h | 61 …ec, TConfig> & fragStore, TIntervalTree & intervalTree, TIntervals & alignIntervals, unsigned offs… in getIdsForRead() argument
75 resize(ids, length(alignIntervals)); in getIdsForRead()
77 TIntervalIter itI = begin(alignIntervals); in getIdsForRead()
78 TIntervalIter itIEnd = end(alignIntervals); in getIdsForRead()
89 itI = begin(alignIntervals); in getIdsForRead()
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