Searched refs:allocLong1D (Results 1 – 21 of 21) sorted by relevance
298 long[] x=KillSwitch.allocLong1D(size); in toArray()320 long[] x=KillSwitch.allocLong1D(len); in toArray()463 keys=KillSwitch.allocLong1D(size3);464 values=KillSwitch.allocLong1D(size3);
298 long[] x=KillSwitch.allocLong1D(size); in toArray()336 long[] x=KillSwitch.allocLong1D(len); in toArray()479 keys=KillSwitch.allocLong1D(size3);
37 array=KillSwitch.allocLong1D(initial); in LongList()381 long[] x=KillSwitch.allocLong1D(size); in toArray()
20 array=KillSwitch.allocLong1D(len); in LongHeap()
320 long[] x=KillSwitch.allocLong1D(len); in toArray()464 values=KillSwitch.allocLong1D(size3);
355 array=KillSwitch.allocLong1D(size3);
194 final static long[] allocLong1D(int len){ in allocLong1D() method in AbstractKmerTableU195 return KillSwitch.allocLong1D(len); in allocLong1D()
39 arrays[i]=allocLong1D(prime+extra); in HashArrayU()
149 final static long[] allocLong1D(int len){ in allocLong1D() method in AbstractKmerTable150 return KillSwitch.allocLong1D(len); in allocLong1D()
160 array=allocLong1D(prime+extra); in resize()
34 array=allocLong1D(prime+extra); in HashArray()47 array=allocLong1D(prime+extra); in HashArray()
251 array=allocLong1D(prime+extra); in resize()
244 array=allocLong1D(prime+extra); in resize()
273 array=allocLong1D(prime+extra); in resize()
187 long[] ret=KillSwitch.allocLong1D(2); in parseStatsLine()
512 if(COUNT_GC){scaf.basecount=KillSwitch.allocLong1D(8);} in processHeader()565 if(COUNT_GC){scaf.basecount=KillSwitch.allocLong1D(8);} in loadScaffoldsFromIndex()582 final long[] acgtn=KillSwitch.allocLong1D(8); in processReference()613 if(COUNT_GC){scaf.basecount=KillSwitch.allocLong1D(8);} in processReference()757 if(COUNT_GC){scaf.basecount=KillSwitch.allocLong1D(8);} in addCoverage()934 if(COUNT_GC){scaf.basecount=KillSwitch.allocLong1D(8);} in processSamLine()
333 final long[] counts=KillSwitch.allocLong1D(8); in countFasta()334 final long[] overall=KillSwitch.allocLong1D(8); in countFasta()625 final long[] counts=KillSwitch.allocLong1D(8); in countFastq()626 final long[] overall=KillSwitch.allocLong1D(8); in countFastq()
306 public final long[] validSums=KillSwitch.allocLong1D(2);
182 public static final long[] allocLong1D(int len){ in allocLong1D() method in KillSwitch
172 final long[] array=KillSwitch.allocLong1D(len); in toSketchArrayOld()
229 long[] rvector=KillSwitch.allocLong1D(2); in processClumps()