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Searched refs:aln_bsp (Results 1 – 3 of 3) sorted by relevance

/dports/biology/ncbi-toolkit/ncbi/sequin/
H A Dsequin4.c7749 ValNodePtr aln_bsp = NULL, vnp; in RevCompBioseqListInteractive() local
7759 aln_bsp = ListSequencesWithAlignments (bsp_list); in RevCompBioseqListInteractive()
7760 if (aln_bsp != NULL) { in RevCompBioseqListInteractive()
7762 for (vnp = aln_bsp; vnp != NULL; vnp = vnp->next) { in RevCompBioseqListInteractive()
7777 for (vnp = aln_bsp; vnp != NULL; vnp = vnp->next) { in RevCompBioseqListInteractive()
7783 aln_bsp = ValNodeFree (aln_bsp); in RevCompBioseqListInteractive()
7797 if (aln_bsp != NULL) { in RevCompBioseqListInteractive()
7798 …VisitAnnotsInSep (GetTopSeqEntryForEntityID (entityID), aln_bsp, FlipEntireAlignmentIfAllSequences… in RevCompBioseqListInteractive()
7799 aln_bsp = ValNodeFree (aln_bsp); in RevCompBioseqListInteractive()
H A Dsequin7.c7524 ValNodePtr vnp, seq_in_aln = NULL, aln_bsp = NULL; in CheckForAlignmentsBeforeCorrection() local
7543 ValNodeAddPointer (&aln_bsp, 0, bsp); in CheckForAlignmentsBeforeCorrection()
7557 for (vnp = aln_bsp; vnp != NULL; vnp = vnp->next) { in CheckForAlignmentsBeforeCorrection()
7565 …VisitAnnotsInSep (GetTopSeqEntryForEntityID (entityID), aln_bsp, FlipEntireAlignmentIfAllSequences… in CheckForAlignmentsBeforeCorrection()
7567 aln_bsp = ValNodeFree (aln_bsp); in CheckForAlignmentsBeforeCorrection()
/dports/biology/ncbi-toolkit/ncbi/api/
H A Dsqnutil2.c23021 ValNodePtr vnp, aln_bsp = NULL; in ListSequencesWithAlignments() local
23026 ValNodeAddPointer (&aln_bsp, 0, bsp); in ListSequencesWithAlignments()
23029 return aln_bsp; in ListSequencesWithAlignments()