Searched refs:alncounts (Results 1 – 1 of 1) sorted by relevance
281 GVec<int> alncounts(30,0); //keep track of the number of read alignments per chromosome [gseq_id] in main() local498 if (alncounts.Count()<=gseq_id) { in main()499 alncounts.Resize(gseq_id+1, 0); in main()501 else if (alncounts[gseq_id]>0) GError(ERR_BAM_SORT); in main()507 alncounts[gseq_id]++; in main()