Searched refs:alt_diff_frac (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/minimap2/minimap2-2.24/ |
| H A D | hit.c | 99 static inline int mm_alt_score(int score, float alt_diff_frac) in mm_alt_score() argument
102 score = (int)(score * (1.0 - alt_diff_frac) + .499); in mm_alt_score()
125 …sk_len, int n, mm_reg1_t *r, int sub_diff, int hard_mask_level, float alt_diff_frac) // and comput… in mm_set_parent() argument
168 if (!rp->is_alt && ri->is_alt) sci = mm_alt_score(sci, alt_diff_frac); in mm_set_parent()
173 if (!rp->is_alt && ri->is_alt) sci = mm_alt_score(sci, alt_diff_frac); in mm_set_parent()
188 void mm_hit_sort(void *km, int *n_regs, mm_reg1_t *r, float alt_diff_frac) in mm_hit_sort() argument
202 if (r[i].is_alt) score = mm_alt_score(score, alt_diff_frac); in mm_hit_sort()
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| H A D | mmpriv.h | 94 …_level, int mask_len, int n, mm_reg1_t *r, int sub_diff, int hard_mask_level, float alt_diff_frac);
99 void mm_hit_sort(void *km, int *n_regs, mm_reg1_t *r, float alt_diff_frac);
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