Searched refs:basesKFiltered (Results 1 – 3 of 3) sorted by relevance
2167 filterstats.basesArtifact+=duk.basesKFiltered; in filter1()2171 filterstats.basesLowQuality+=(bRemoved-duk.basesKFiltered); in filter1()2273 filterstats.basesArtifact+=duk.basesKFiltered; in filter2()2275 filterstats.basesLowQuality+=(bRemoved-duk.basesKFiltered); in filter2()2363 filterstats.basesRiboKmer+=duk.basesKFiltered; in filterRibo()
960 basesKFiltered+" bases ("+toPercent(basesKFiltered, basesIn)+")"); in process2()1235 putRqc("kfilteredBases", basesKFiltered, false); in addToRqcMap()1625 basesKFiltered+=pt.basesKFilteredT; in spawnProcessThreads()3458 long basesKFiltered=0; field in BBDuk2
1218 basesKFiltered+" bases ("+toPercent(basesKFiltered, basesIn)+")"); in process2()1308 jsonStats.add("basesKFiltered", basesKFiltered); in toJson()1616 putRqc("kfilteredBases", basesKFiltered, false, true); in addToRqcMap()1987 basesKFiltered+=pt.basesKFilteredT; in spawnProcessThreads()4630 long basesKFiltered=0; local