Searched refs:basesStr (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/artemis/artemis-17.0.1-11-g3e43d27e/uk/ac/sanger/artemis/components/variant/ |
| H A D | IOUtils.java | 791 String basesStr; in writeOrViewRange() local
818 basesStr = basesStr.toUpperCase(); in writeOrViewRange()
905 String basesStr, in getAllBasesInRegion() argument
940 return basesStr; in getAllBasesInRegion()
983 basesStr = maskSites(sbeg, record.getPos(), baseNum, isFwd, basesStr); in getBasesInRegion()
988 basesStr = getSeqsVariation(record, basesStr, sbeg, isFwd, vcf_v4); in getBasesInRegion()
994 basesStr = basesStr.substring(0, position) + 'n' + in getBasesInRegion()
1012 basesStr = maskSites(sbeg, len+sbeg, baseNum, isFwd, basesStr); in getBasesInRegion()
1014 return basesStr; in getBasesInRegion()
1034 basesStr = basesStr.substring(0, position) + 'n' + in maskSites()
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| /dports/misc/usd/USD-21.11/pxr/base/plug/ |
| H A D | plugin.cpp | 613 std::string basesStr; local
615 basesStr += j->GetTypeName() + " ";
626 basesStr.c_str() );
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