| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/writers/unit_test/gff3writer_test_cases/ |
| H A D | rw-1196-hep-b.entry.asn | 167 biomol genomic,
293 biomol peptide,
340 biomol peptide,
396 biomol peptide,
447 biomol peptide,
496 biomol peptide,
545 biomol peptide,
749 biomol genomic,
863 biomol peptide,
910 biomol peptide,
[all …]
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/unit_test/fasta_reader_test_cases/ |
| H A D | rw710a.asn | 21 biomol genomic
49 biomol genomic
77 biomol genomic
106 biomol genomic
134 biomol genomic
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objects/seq/ |
| H A D | MolInfo.cpp | 67 TBiomol biomol = GetBiomol(); in GetLabel() local
69 (*label) += sep + tv->FindName(biomol, true); in GetLabel()
116 string CMolInfo::GetBiomolName (CMolInfo::TBiomol biomol) in GetBiomolName() argument
121 g_iter->second != biomol) { in GetBiomolName()
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objects/seq/ |
| H A D | MolInfo.cpp | 67 TBiomol biomol = GetBiomol(); in GetLabel() local
69 (*label) += sep + tv->FindName(biomol, true); in GetLabel()
116 string CMolInfo::GetBiomolName (CMolInfo::TBiomol biomol) in GetBiomolName() argument
121 g_iter->second != biomol) { in GetBiomolName()
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/writers/unit_test/gtfwriter_test_cases/ |
| H A D | rw-836-3.entry.asn | 195 biomol genomic
3516 biomol peptide
3578 biomol peptide
3626 biomol peptide
3675 biomol peptide
3720 biomol peptide
3765 biomol peptide
3809 biomol peptide
3859 biomol peptide
3905 biomol peptide
[all …]
|
| H A D | rw-836-1.entry.asn | 322 biomol genomic,
17626 biomol peptide,
17700 biomol peptide,
17774 biomol peptide,
17848 biomol peptide,
17922 biomol peptide,
17996 biomol peptide,
18070 biomol peptide,
18144 biomol peptide,
18218 biomol peptide,
[all …]
|
| H A D | rw-836-2.entry.asn | 1888 biomol genomic
10065 biomol peptide
10115 biomol peptide
10164 biomol peptide
10225 biomol peptide
10323 biomol peptide
10737 biomol peptide
10787 biomol peptide
10839 biomol peptide
10883 biomol peptide
[all …]
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/unit_test/entry_edit_test_cases/ |
| H A D | trim_sequence_and_annotation.test5.output_expected.asn | 104 biomol genomic
569 biomol peptide,
621 biomol peptide,
673 biomol peptide,
725 biomol peptide,
779 biomol peptide,
831 biomol peptide,
884 biomol peptide,
938 biomol peptide,
990 biomol peptide,
[all …]
|
| H A D | trim_sequence_and_annotation.test5.input_entry.asn | 104 biomol genomic
693 biomol peptide,
745 biomol peptide,
797 biomol peptide,
849 biomol peptide,
903 biomol peptide,
955 biomol peptide,
1008 biomol peptide,
1062 biomol peptide,
1114 biomol peptide,
[all …]
|
| H A D | segregate.basic_test.input_entry.asn | 162 biomol genomic } ,
224 biomol peptide } } ,
307 biomol genomic } ,
389 biomol genomic } ,
442 biomol genomic } ,
497 biomol genomic } ,
533 biomol genomic } ,
585 biomol genomic } ,
|
| H A D | segregate.basic_test.output_expected.asn | 170 biomol genomic
275 biomol genomic
350 biomol genomic
554 biomol genomic
626 biomol peptide
721 biomol genomic
770 biomol genomic
838 biomol genomic
|
| H A D | trim_sequence_and_annotation.test4.output_expected.asn | 167 biomol genomic,
1157 biomol peptide
1200 biomol peptide
1243 biomol peptide
1284 biomol peptide
1325 biomol peptide
1371 biomol peptide
1419 biomol peptide
1460 biomol peptide
1505 biomol peptide
[all …]
|
| H A D | trim_sequence_and_annotation.test4.input_entry.asn | 167 biomol genomic,
1112 biomol peptide
1152 biomol peptide
1195 biomol peptide
1238 biomol peptide
1279 biomol peptide
1320 biomol peptide
1366 biomol peptide
1414 biomol peptide
1455 biomol peptide
[all …]
|
| H A D | trim_sequence_and_annotation.test6.output_expected.asn | 98 biomol genomic
181 biomol genomic
259 biomol genomic
337 biomol genomic
|
| H A D | trim_sequence_and_annotation.test6.input_entry.asn | 98 biomol genomic
178 biomol genomic
277 biomol genomic
355 biomol genomic
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/asnval/TestRes.asnval/tests/test1/test-cases/ |
| H A D | asnfail_all.sqn | 176 biomol genomic } ,
248 biomol peptide ,
332 biomol genomic } ,
404 biomol peptide ,
560 biomol peptide ,
716 biomol peptide ,
872 biomol peptide ,
1028 biomol peptide ,
25813 biomol peptide ,
26031 biomol peptide ,
[all …]
|
| H A D | SQD-1475.sqn | 125 biomol genomic } ,
228 biomol genomic } ,
329 biomol genomic } ,
434 biomol genomic } ,
546 biomol genomic } ,
648 biomol genomic } ,
754 biomol genomic } ,
856 biomol genomic } ,
958 biomol genomic } ,
1059 biomol genomic } ,
[all …]
|
| H A D | ALACA30300.sqn | 180 biomol genomic } ,
262 biomol peptide ,
345 biomol genomic } ,
427 biomol peptide ,
592 biomol peptide ,
757 biomol peptide ,
922 biomol peptide ,
1087 biomol peptide ,
1252 biomol peptide ,
1417 biomol peptide ,
[all …]
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/cleanup/test/test_cases/ReassignIds/ |
| H A D | example2.asn | 268 biomol genomic
972 biomol peptide,
1021 biomol peptide,
1070 biomol peptide,
1121 biomol peptide,
1168 biomol peptide,
1213 biomol peptide,
1261 biomol peptide,
1309 biomol peptide,
1355 biomol peptide,
[all …]
|
| H A D | example2.ref | 268 biomol genomic
972 biomol peptide,
1021 biomol peptide,
1070 biomol peptide,
1121 biomol peptide,
1168 biomol peptide,
1213 biomol peptide,
1261 biomol peptide,
1309 biomol peptide,
1355 biomol peptide,
[all …]
|
| H A D | example3.asn | 286 biomol genomic,
394 biomol genomic,
502 biomol genomic,
610 biomol genomic,
717 biomol genomic,
824 biomol genomic,
932 biomol genomic,
1040 biomol genomic,
5664 biomol genomic,
6339 biomol genomic,
[all …]
|
| H A D | example3.ref | 286 biomol genomic,
394 biomol genomic,
502 biomol genomic,
610 biomol genomic,
717 biomol genomic,
824 biomol genomic,
932 biomol genomic,
1040 biomol genomic,
5664 biomol genomic,
6339 biomol genomic,
[all …]
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/writers/unit_test/srcwriter_test_cases/ |
| H A D | test.srcchk.input | 239 biomol genomic ,
10907 biomol peptide ,
10985 biomol peptide ,
11064 biomol peptide ,
11142 biomol peptide ,
11221 biomol peptide ,
11299 biomol peptide ,
11377 biomol peptide ,
11454 biomol peptide ,
11532 biomol peptide ,
[all …]
|
| H A D | localid_example.seqentry.input | 142 biomol genomic } } ,
191 biomol peptide ,
302 biomol genomic } } ,
351 biomol peptide ,
462 biomol genomic } } ,
511 biomol peptide ,
622 biomol genomic } } ,
671 biomol peptide ,
782 biomol genomic } } ,
831 biomol peptide ,
[all …]
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/flatfile/ |
| H A D | fcleanup.cpp | 218 int biomol = objects::CMolInfo::eBiomol_unknown; in MoveBiomolToTop() local
232 if (biomol == objects::CMolInfo::eBiomol_unknown) in MoveBiomolToTop()
233 biomol = cur_biomol; in MoveBiomolToTop()
234 else if (biomol != cur_biomol) in MoveBiomolToTop()
241 if (biomol != objects::CMolInfo::eBiomol_unknown) in MoveBiomolToTop()
263 new_descr->SetMolinfo().SetBiomol(biomol); in MoveBiomolToTop()
|