| /dports/biology/ncbi-toolkit/ncbi/desktop/ |
| H A D | udvpanel.c | 400 Int4 bsp_start,bsp_stop; in UDV_IsLetterSelected() local
408 bsp_stop=SeqLocStop(slp); in UDV_IsLetterSelected()
411 bsp_stop=UDV_RevertBioSeqCoord(bsp_stop,bspLength); in UDV_IsLetterSelected()
412 if (bsp_stop<bsp_start) in UDV_IsLetterSelected()
470 *old_pos=bsp_stop; in UDV_GetClosetSeqLocGivenBspPos()
480 diff=bsp_pos-bsp_stop; in UDV_GetClosetSeqLocGivenBspPos()
500 *old_pos=bsp_stop; in UDV_GetClosetSeqLocGivenBspPos()
504 bsp_stop=bsp_pos; in UDV_GetClosetSeqLocGivenBspPos()
614 bsp_stop=SeqLocStop(slp); in UDV_MSG_SELECT()
619 bsp_stop=UDV_RevertBioSeqCoord(bsp_stop,vdp->bsp_i.bspLength); in UDV_MSG_SELECT()
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| /dports/biology/ncbi-toolkit/ncbi/ddv/ |
| H A D | ddvclick.c | 444 bsp_stop=SeqLocStop((SeqLocPtr)vnp->data.ptrvalue); in DDV_GetClosetSeqLocGivenBspPos()
452 *old_pos=bsp_stop; in DDV_GetClosetSeqLocGivenBspPos()
462 diff=bsp_pos-bsp_stop; in DDV_GetClosetSeqLocGivenBspPos()
479 diff_r=bsp_stop-bsp_pos; in DDV_GetClosetSeqLocGivenBspPos()
482 *old_pos=bsp_stop; in DDV_GetClosetSeqLocGivenBspPos()
486 bsp_stop=bsp_pos; in DDV_GetClosetSeqLocGivenBspPos()
513 Int4 bsp_stop) in DDV_IsFullBspAlreadySel() argument
862 bsp_start,bsp_stop); in DDV_DispSelRangeInStatus()
898 Int4 ParaGLine_num, bsp_start, bsp_stop; in DDV_DispStatus() local
1696 &bsp_start,&bsp_stop); in DDV_ClickProc()
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| H A D | ddvopen.c | 473 Int4 bsp_start,bsp_stop; in DDV_IsLetterSelected() local
481 bsp_stop=SeqLocStop(slp); in DDV_IsLetterSelected()
482 if (bsp_pos>=bsp_start && bsp_pos<=bsp_stop){ in DDV_IsLetterSelected()
612 Int4 from_col,to_col,from_row,to_row,bsp_start,bsp_stop,nBspInstances=0,i, in DDV_MSG_SELECT() local
648 bsp_stop=DDV_GetDispCoordGivenBspCoord(dmp->MSA_d.pgp_l.TableHead[row_num], in DDV_MSG_SELECT()
650 if (bsp_start!=(Int4)-1 && bsp_stop!=(Int4)-1){ in DDV_MSG_SELECT()
658 _max_(bsp_start,from_col),_min_(bsp_stop,to_col), in DDV_MSG_SELECT()
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| H A D | ddvgraph.c | 827 Int4 bspLength,bsp_start,bsp_stop,from_pgp,to_pgp; in DDV_DrawParaG() local
846 DDV_GetSequenceFromParaG(pgp,&szSeq,bspLength,IsAA,&strand,&bsp_start,&bsp_stop); in DDV_DrawParaG()
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| H A D | ddvcreate.c | 3005 Int4 i,bsp_start,bsp_stop,mask_start,mask_stop,scan_from, in DDV_LayoutMaskRegions() local
3012 UDV_GetBspRangeinPGPList(vnp_query,&bsp_start,&bsp_stop); in DDV_LayoutMaskRegions()
3038 if (mask_stop>=bsp_start && mask_start<=bsp_stop){ in DDV_LayoutMaskRegions()
3040 scan_to=_min_(mask_stop,bsp_stop)+1; in DDV_LayoutMaskRegions()
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| /dports/biology/ncbi-toolkit/ncbi/api/ |
| H A D | udvseq.c | 630 Int4Ptr bsp_start,Int4Ptr bsp_stop) in UDV_GetBspRangeinPGPList() argument
637 *bsp_stop=INT4_MIN; in UDV_GetBspRangeinPGPList()
646 *bsp_stop=MAX(*bsp_stop,to_bsp); in UDV_GetBspRangeinPGPList()
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| H A D | pgppop.c | 1371 Int4 PNTR bsp_start,Int4 PNTR bsp_stop) in DDV_GetSequenceFromParaG() argument
1465 if (bsp_stop) *bsp_stop=to; in DDV_GetSequenceFromParaG()
1845 Int4 i,bsp_start,bsp_stop,mask_start,mask_stop,scan_from, in DDV_HideMaskedLetters() local
1855 UDV_ComputeBspCoordRangeinPGP(pgp,&bsp_start,&bsp_stop); in DDV_HideMaskedLetters()
1882 if (mask_stop>=bsp_start && mask_start<=bsp_stop){ in DDV_HideMaskedLetters()
1884 scan_to=_min_(mask_stop,bsp_stop)+1; in DDV_HideMaskedLetters()
1934 Int4 bsp_start,bsp_stop, n, j; in DDV_DisplayParaG() local
1961 &bsp_start,&bsp_stop)) in DDV_DisplayParaG()
2085 if (bsp_strand==Seq_strand_minus) iVal=bsp_stop;/**/ in DDV_DisplayParaG()
2215 else iVal=bsp_stop; in DDV_DisplayParaG()
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| H A D | udvseq.h | 303 Int4Ptr bsp_start,Int4Ptr bsp_stop);
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| H A D | pgppop.h | 270 Int4 PNTR bsp_start,Int4 PNTR bsp_stop);
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