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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/streamtest/
H A Dprocess_explore.hpp92 if (bsx.IsNA()) { in SeqEntryProcess()
114 if (bsx->IsNA()) { in SeqEntryProcess()
126 CRef<CBioseqIndex> bsx; in SeqEntryProcess() local
137 if (bsx) { in SeqEntryProcess()
147 if (bsx) { in SeqEntryProcess()
154 if (bsx) { in SeqEntryProcess()
155 DoOneBioseq(*bsx); in SeqEntryProcess()
159 if (! bsx) { in SeqEntryProcess()
171 CBioseqIndex& bsx ) in DoOneBioseq() argument
200 if (bsx.IsAA()) { in DoOneBioseq()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/util/
H A Dcreate_defline.cpp437 if (! bsx) { in x_SetFlagsIdx()
450 m_IsNA = bsx->IsNA(); in x_SetFlagsIdx()
451 m_IsAA = bsx->IsAA(); in x_SetFlagsIdx()
460 m_IsNC = bsx->IsNC(); in x_SetFlagsIdx()
461 m_IsNM = bsx->IsNM(); in x_SetFlagsIdx()
462 m_IsNR = bsx->IsNR(); in x_SetFlagsIdx()
1167 if (! bsx) { in x_SetBioSrcIdx()
2106 if (! bsx) { in x_SetTitleFromProteinIdx()
3005 if (! bsx) { in x_AdjustProteinTitleSuffixIdx()
3119 if (bsx) { in x_AdjustProteinTitleSuffixIdx()
[all …]
H A Dindexer.cpp451 for (auto& bsx : m_BsxList) { in IsFetchFailure() local
673 for (auto& bsx : m_BsxList) { in GetBioseqIndex() local
674 return bsx; in GetBioseqIndex()
686 return bsx; in GetBioseqIndex()
698 return bsx; in GetBioseqIndex()
711 return bsx; in GetBioseqIndex()
723 return bsx; in GetBioseqIndex()
3081 : m_Bsx(&bsx), in CGapIndex()
3099 m_Bsx(&bsx) in CDescriptorIndex()
3114 m_Bsx(&bsx) in CFeatureIndex()
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/util/
H A Dcreate_defline.cpp437 if (! bsx) { in x_SetFlagsIdx()
450 m_IsNA = bsx->IsNA(); in x_SetFlagsIdx()
451 m_IsAA = bsx->IsAA(); in x_SetFlagsIdx()
460 m_IsNC = bsx->IsNC(); in x_SetFlagsIdx()
461 m_IsNM = bsx->IsNM(); in x_SetFlagsIdx()
462 m_IsNR = bsx->IsNR(); in x_SetFlagsIdx()
1167 if (! bsx) { in x_SetBioSrcIdx()
2106 if (! bsx) { in x_SetTitleFromProteinIdx()
3005 if (! bsx) { in x_AdjustProteinTitleSuffixIdx()
3119 if (bsx) { in x_AdjustProteinTitleSuffixIdx()
[all …]
H A Dindexer.cpp451 for (auto& bsx : m_BsxList) { in IsFetchFailure() local
673 for (auto& bsx : m_BsxList) { in GetBioseqIndex() local
674 return bsx; in GetBioseqIndex()
686 return bsx; in GetBioseqIndex()
698 return bsx; in GetBioseqIndex()
711 return bsx; in GetBioseqIndex()
723 return bsx; in GetBioseqIndex()
3060 : m_Bsx(&bsx), in CGapIndex()
3078 m_Bsx(&bsx) in CDescriptorIndex()
3093 m_Bsx(&bsx) in CFeatureIndex()
[all …]
/dports/games/ultimatestunts/ultimatestunts-srcdata-0771/graphics/
H A Dtexture.cpp221 int bsx; in scaleImage() local
230 bsx = in->sizeX / xs; in scaleImage()
233 if(bsx<1) {bsx=1;} in scaleImage()
235 opp = bsx*bsy; in scaleImage()
244 for(i=0; i<bsx; i++) in scaleImage()
247 r += *(in->data + pixsize*(bsx*x+i+in->sizeX*(bsy*y+j)) ); in scaleImage()
248 g += *(in->data + pixsize*(bsx*x+i+in->sizeX*(bsy*y+j)) +1); in scaleImage()
249 b += *(in->data + pixsize*(bsx*x+i+in->sizeX*(bsy*y+j)) +2); in scaleImage()
251 a += *(in->data + pixsize*(bsx*x+i+in->sizeX*(bsy*y+j)) +3); in scaleImage()
/dports/math/reduce/Reduce-svn5758-src/csl/fox/src/
H A DFX4Splitter.cpp241 FXint tsx,bsx,osy; in layout() local
250 tsx=bsx=splitx; in layout()
254 case ExpandTopLeft: tsx=bsx=width; osy=height; break; in layout()
255 case ExpandTopRight: tsx=bsx=-barsize; osy=height; break; in layout()
256 case ExpandBottomRight: tsx=bsx=-barsize; osy=-barsize; break; in layout()
257 case ExpandBottomLeft: tsx=bsx=width; osy=-barsize; break; in layout()
259 case ExpandTopLeft|ExpandTopRight: tsx=bsx=splitx; osy=height; break; in layout()
262 case ExpandBottomLeft|ExpandTopLeft: tsx=bsx=width; osy=splity; break; in layout()
265 case ExpandBottomRight|ExpandTopRight: tsx=bsx=-barsize; osy=splity; break; in layout()
278 if(bl) bl->position(0,osy+barsize,bsx,height-osy-barsize); in layout()
[all …]
/dports/x11-toolkits/fox16/fox-1.6.57/src/
H A DFX4Splitter.cpp241 FXint tsx,bsx,osy; in layout() local
250 tsx=bsx=splitx; in layout()
254 case ExpandTopLeft: tsx=bsx=width; osy=height; break; in layout()
255 case ExpandTopRight: tsx=bsx=-barsize; osy=height; break; in layout()
256 case ExpandBottomRight: tsx=bsx=-barsize; osy=-barsize; break; in layout()
257 case ExpandBottomLeft: tsx=bsx=width; osy=-barsize; break; in layout()
259 case ExpandTopLeft|ExpandTopRight: tsx=bsx=splitx; osy=height; break; in layout()
262 case ExpandBottomLeft|ExpandTopLeft: tsx=bsx=width; osy=splity; break; in layout()
265 case ExpandBottomRight|ExpandTopRight: tsx=bsx=-barsize; osy=splity; break; in layout()
278 if(bl) bl->position(0,osy+barsize,bsx,height-osy-barsize); in layout()
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/dports/science/afni/afni-AFNI_21.3.16/src/
H A Dibeta.c17 double bs1[NJ-1] , bsx[NJ-1] , bs1x[NJ-1] ; in ibeta() local
51 bsx[jj] = AITKEN( asx[jj] , asx[jj+1] , asx[jj+2] ) ; in ibeta()
57 csx[jj] = AITKEN( bsx[jj] , bsx[jj+1] , bsx[jj+2] ) ; in ibeta()
68 DMP(asx,NJ) ; DMP(bsx,NJ-2) ; DMP(csx,NJ-4) ; in ibeta()
/dports/audio/gogglesmm/gogglesmm-1.2.2/cfox/lib/
H A DFX4Splitter.cpp256 FXint tsx,bsx,lsy,rsy; in layout() local
266 tsx=bsx=splitx; in layout()
272 case ExpandNone: tsx=bsx=width; lsy=rsy=height; break; in layout()
275 case ExpandTopLeft: tsx=bsx=width; lsy=rsy=height; break; in layout()
276 case ExpandTopRight: tsx=bsx=-barsize; lsy=rsy=height; break; in layout()
277 case ExpandBottomLeft: tsx=bsx=width; lsy=rsy=-barsize; break; in layout()
278 case ExpandBottomRight: tsx=bsx=-barsize; lsy=rsy=-barsize; break; in layout()
283 case ExpandTopLeft|ExpandBottomLeft: tsx=bsx=width; break; in layout()
284 case ExpandTopRight|ExpandBottomRight: tsx=bsx=-barsize; break; in layout()
300 if(pbl) pbl->position(0,lsy+barsize,bsx,height-lsy-barsize); in layout()
[all …]
/dports/x11-toolkits/fox17/fox-1.7.77/lib/
H A DFX4Splitter.cpp256 FXint tsx,bsx,lsy,rsy; in layout() local
266 tsx=bsx=splitx; in layout()
272 case ExpandNone: tsx=bsx=width; lsy=rsy=height; break; in layout()
275 case ExpandTopLeft: tsx=bsx=width; lsy=rsy=height; break; in layout()
276 case ExpandTopRight: tsx=bsx=-barsize; lsy=rsy=height; break; in layout()
277 case ExpandBottomLeft: tsx=bsx=width; lsy=rsy=-barsize; break; in layout()
278 case ExpandBottomRight: tsx=bsx=-barsize; lsy=rsy=-barsize; break; in layout()
283 case ExpandTopLeft|ExpandBottomLeft: tsx=bsx=width; break; in layout()
284 case ExpandTopRight|ExpandBottomRight: tsx=bsx=-barsize; break; in layout()
300 if(pbl) pbl->position(0,lsy+barsize,bsx,height-lsy-barsize); in layout()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/format/
H A Dsource_item.cpp166 CRef<CBioseqIndex> bsx = idx->GetBioseqIndex (bsh); in x_GatherInfoIdx() local
167 if (! bsx) return; in x_GatherInfoIdx()
169 m_Taxname = &bsx->GetTaxname(); in x_GatherInfoIdx()
170 m_Common = &bsx->GetCommon(); in x_GatherInfoIdx()
171 m_Taxid = bsx->GetTaxid(); in x_GatherInfoIdx()
172 m_UsingAnamorph = bsx->IsUsingAnamorph(); in x_GatherInfoIdx()
174 const string& lineage = bsx->GetLineage(); in x_GatherInfoIdx()
178 m_Lineage = bsx->GetLineage(); in x_GatherInfoIdx()
181 const string* orgnlle = &bsx->GetOrganelle(); in x_GatherInfoIdx()
H A Dcontext.cpp362 CRef<CBioseqIndex> bsx = idx->GetBioseqIndex (m_Handle); in HasMultiIntervalGenes() local
363 if (! bsx) return false; in HasMultiIntervalGenes()
364 return bsx->HasMultiIntervalGenes(); in HasMultiIntervalGenes()
452 CRef<CBioseqIndex> bsx = idx->GetBioseqIndex (m_Handle); in GetTaxname() local
453 if (bsx) { in GetTaxname()
454 m_Taxname = bsx->GetTaxname(); in GetTaxname()
472 if (bsx) { in IsCrossKingdom()
473 m_IsCrossKingdom = bsx->IsCrossKingdom(); in IsCrossKingdom()
752 CRef<CBioseqIndex> bsx = idx->GetBioseqIndex (m_Handle); in HasOperon() local
753 if (! bsx) return false; in HasOperon()
[all …]
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/format/
H A Dsource_item.cpp166 CRef<CBioseqIndex> bsx = idx->GetBioseqIndex (bsh); in x_GatherInfoIdx() local
167 if (! bsx) return; in x_GatherInfoIdx()
169 m_Taxname = &bsx->GetTaxname(); in x_GatherInfoIdx()
170 m_Common = &bsx->GetCommon(); in x_GatherInfoIdx()
171 m_Taxid = bsx->GetTaxid(); in x_GatherInfoIdx()
172 m_UsingAnamorph = bsx->IsUsingAnamorph(); in x_GatherInfoIdx()
174 const string& lineage = bsx->GetLineage(); in x_GatherInfoIdx()
178 m_Lineage = bsx->GetLineage(); in x_GatherInfoIdx()
181 const string* orgnlle = &bsx->GetOrganelle(); in x_GatherInfoIdx()
H A Dcontext.cpp362 CRef<CBioseqIndex> bsx = idx->GetBioseqIndex (m_Handle); in HasMultiIntervalGenes() local
363 if (! bsx) return false; in HasMultiIntervalGenes()
364 return bsx->HasMultiIntervalGenes(); in HasMultiIntervalGenes()
452 CRef<CBioseqIndex> bsx = idx->GetBioseqIndex (m_Handle); in GetTaxname() local
453 if (bsx) { in GetTaxname()
454 m_Taxname = bsx->GetTaxname(); in GetTaxname()
472 if (bsx) { in IsCrossKingdom()
473 m_IsCrossKingdom = bsx->IsCrossKingdom(); in IsCrossKingdom()
752 CRef<CBioseqIndex> bsx = idx->GetBioseqIndex (m_Handle); in HasOperon() local
753 if (! bsx) return false; in HasOperon()
[all …]
/dports/science/liggghts/LIGGGHTS-PUBLIC-3.8.0-26-g6e873439/lib/gpu/
H A Dlal_neighbor_gpu.cu139 int bsx = BLOCK_SIZE_X; in calc_neigh_list_cell() local
155 int cap=ucl_ceil((numtyp)(icell_end - icell_begin)/bsx); in calc_neigh_list_cell()
157 int i = icell_begin + tid + ii*bsx; in calc_neigh_list_cell()
194 int num_iter = ucl_ceil((numtyp)num_atom_cell/bsx); in calc_neigh_list_cell()
197 int end_idx = min(bsx, num_atom_cell-k*bsx); in calc_neigh_list_cell()
200 pid_j = cell_particle_id[tid+k*bsx+jcell_begin]; in calc_neigh_list_cell()
/dports/science/PETSc/petsc-3.14.1/src/vec/vscat/impls/
H A Dvscat.c555 PetscInt nx,ny,bsx,bsy,min,max; local
558 ierr = ISGetBlockSize(ix,&bsx);CHKERRQ(ierr);
559 min = PetscMin(bsx,bsy);
560 max = PetscMax(bsx,bsy);
578 PetscInt ystart,ystride,ysize,bsx; local
583 …if (VecScatterOptimizedBS(bsx) && ((ystart % bsx) == 0) && (ystride == 1) && ((ysize % bsx) == 0))…
591 idy[0] = ystart/bsx;
680 PetscInt ystart,ystride,ysize,bsx; local
683 ierr = ISGetBlockSize(ix,&bsx);CHKERRQ(ierr);
685 …if (VecScatterOptimizedBS(bsx) && ((ystart % bsx) == 0) && (ystride == 1) && ((ysize % bsx) == 0))…
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/dports/games/naev/naev-0.7.0/src/
H A Dcollision.h18 const glTexture* bt, const int bsx, const int bsy, const Vector2d* bp,
23 const glTexture* bt, const int bsx, const int bsy, const Vector2d* bp,
/dports/science/lammps/lammps-stable_29Sep2021/lib/gpu/
H A Dlal_neighbor_gpu.cu189 int bsx = BLOCK_SIZE_X; in calc_neigh_list_cell() local
192 int subgroup_id_global = BLOCK_ID_X * bsx / simd_size + subgroup_id_local; in calc_neigh_list_cell()
375 int bsx = BLOCK_SIZE_X; in calc_neigh_list_cell() local
391 int cap=ucl_ceil((numtyp)(icell_end - icell_begin)/bsx); in calc_neigh_list_cell()
393 int i = icell_begin + tid + ii*bsx; in calc_neigh_list_cell()
430 int num_iter = ucl_ceil((numtyp)num_atom_cell/bsx); in calc_neigh_list_cell()
433 int end_idx = min(bsx, num_atom_cell-k*bsx); in calc_neigh_list_cell()
436 pid_j = cell_particle_id[tid+k*bsx+jcell_begin]; in calc_neigh_list_cell()
/dports/multimedia/zoneminder/zoneminder-1.36.5/src/
H A Dzm_zone.cpp361 BlobStats *bsx, *bsy; in CheckAlarms() local
382 bsx = &blob_stats[last_x]; in CheckAlarms()
391 bsx->count++; in CheckAlarms()
392 if (x > bsx->hi_x) bsx->hi_x = x; in CheckAlarms()
393 if ((int)y > bsx->hi_y) bsx->hi_y = y; in CheckAlarms()
396 bsm = bsx->count>=bsy->count?bsx:bsy; in CheckAlarms()
397 bss = bsm==bsx?bsy:bsx; in CheckAlarms()
467 bsx->count++; in CheckAlarms()
468 if (x > bsx->hi_x) bsx->hi_x = x; in CheckAlarms()
469 if ((int)y > bsx->hi_y) bsx->hi_y = y; in CheckAlarms()
/dports/games/shockolate/systemshock-0.8.2-43-ga9eb1b93/src/GameSrc/
H A Damaploop.c263 int i, cb, bsx, bsy, cx, cy; in fsmap_button_redraw() local
282 bsx = grd_bm.w - AMAP_BORDER + 3; in fsmap_button_redraw()
285 ss_box(cx, cy, bsx, bsy); in fsmap_button_redraw()
286 bsx -= cx; in fsmap_button_redraw()
289 ss_int_line(cx, cy, cx + bsx - 1, cy + bsy - 1); in fsmap_button_redraw()
290 ss_int_line(cx + bsx - 1, cy, cx, cy + bsy - 1); in fsmap_button_redraw()
291 …ss_string(get_temp_string(REF_STR_DirectionAbbrev + NORTH), cx + (bsx >> 1) - 3, cy + (bsy >> 2) -… in fsmap_button_redraw()
292 …ss_string(get_temp_string(REF_STR_DirectionAbbrev + EAST), cx + (bsx >> 1) + (bsx >> 2) - 2 + AMAP… in fsmap_button_redraw()
294 …ss_string(get_temp_string(REF_STR_DirectionAbbrev + SOUTH), cx + (bsx >> 1) - 3, cy + bsy - (bsy >… in fsmap_button_redraw()
295 …gr_string(get_temp_string(REF_STR_DirectionAbbrev + WEST), cx + (bsx >> 3) - 2 + AMAP_BORDER, cy +… in fsmap_button_redraw()
/dports/games/xscavenger/xscavenger-1.4.5/src/
H A Danim.c38 int bsx,bsy; variable
223 bsx=x2-x1+1; in makebrush()
228 bhx=bsx>>1; in makebrush()
241 p3=p2+bsx-1; in flipx()
248 p1+=bsx; in flipx()
257 p2=p1+bsx*(bsy-1); in flipy()
266 p2-=bsx+bsx; in flipy()
281 for(i=0;i<bsx;i++) in rot90()
284 i=bsx; in rot90()
285 bsx=bsy; in rot90()
[all …]
/dports/games/sdl_scavenger/sdlscav-145/
H A Danim.c34 int bsx,bsy; variable
255 bsx=x2-x1+1; in makebrush()
260 bhx=bsx>>1; in makebrush()
273 p3=p2+bsx-1; in flipx()
280 p1+=bsx; in flipx()
289 p2=p1+bsx*(bsy-1); in flipy()
298 p2-=bsx+bsx; in flipy()
313 for(i=0;i<bsx;i++) in rot90()
316 i=bsx; in rot90()
317 bsx=bsy; in rot90()
[all …]
/dports/games/libretro-beetle_bsnes/beetle-bsnes-libretro-b65ded5bde278c18af538c687db9b72c995b220a/mednafen/snes/src/
H A DMakefile83 objects += bsx srtc sdd1 spc7110 cx4 dsp1 dsp2 dsp3 dsp4 obc1 st010 st011 st018
173 obj/bsx.o : chip/bsx/bsx.cpp chip/bsx/*
/dports/lang/slib/slib-3b6/
H A Ddiffer.scm220 (do ((bsx start-b (+ 1 bsx))
222 ((not (and (< bsx bdx)
224 (eqv? (array-ref A asx) (array-ref B bsx))))
226 (let ((delta (- (- bdx bsx) (- adx asx))))
228 (diff2ez fp fpoff CCRR B bsx (+ 1 bdx) A asx (+ 1 adx)
230 (diff2ez fp fpoff CCRR A asx (+ 1 adx) B bsx (+ 1 bdx)

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