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Searched refs:case_vector (Results 1 – 12 of 12) sorted by relevance

/dports/biology/sra-tools/sra-tools-2.11.0/tools/qual-recalib-stat/
H A Dstat_mod_2.c499 if ( data->case_vector != NULL ) in whack_statistic()
501 free( data->case_vector ); in whack_statistic()
569 data->case_vector[ base_idx-- ] = CASE_IGNORE;
601 data->case_vector[ base_idx ] = CASE_IGNORE;
608 data->case_vector[ base_idx ] = CASE_MISMATCH;
756 data->case_vector[si + k] = CASE_IGNORE; in extract_spotgroup_statistic()
763 data->case_vector[si] = CASE_IGNORE; in extract_spotgroup_statistic()
765 data->case_vector[si] = CASE_MISMATCH; in extract_spotgroup_statistic()
767 data->case_vector[si] = CASE_MATCH; in extract_spotgroup_statistic()
773 data->case_vector[si] = CASE_IGNORE; in extract_spotgroup_statistic()
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H A Dstat_mod.c149 data->case_vector = calloc( 1, data->case_vector_len ); in make_statistic()
150 if ( data->case_vector == NULL ) in make_statistic()
172 if ( data->case_vector != NULL ) in whack_statistic()
174 free( data->case_vector ); in whack_statistic()
175 data->case_vector = NULL; in whack_statistic()
434 data->case_vector[ base_idx ] = CASE_IGNORE; in walk_exclude_vector()
442 data->case_vector[ base_idx-- ] = CASE_IGNORE; in walk_exclude_vector()
491 uint8_t c_temp = data->case_vector[ p1 ]; in reverse_read_and_case()
495 data->case_vector[ p1 ] = data->case_vector[ p2 ]; in reverse_read_and_case()
499 data->case_vector[ p2 ] = c_temp; in reverse_read_and_case()
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H A Dstat_mod_1.c328 rc = make_vector( (void**)&data->case_vector, &data->case_vector_len, 512 ); in make_statistic()
351 if ( data->case_vector != NULL ) in whack_statistic()
353 free( data->case_vector ); in whack_statistic()
464 data->case_vector[ base_idx-- ] = CASE_IGNORE; in walk_exclude_vector()
481 data->case_vector[ base_idx++ ] = CASE_IGNORE; in walk_exclude_vector()
496 data->case_vector[ base_idx ] = CASE_IGNORE; in walk_exclude_vector()
503 data->case_vector[ base_idx ] = CASE_MISMATCH; in walk_exclude_vector()
610 rc_t rc = expand_and_clear_vector( (void**)&data->case_vector, in extract_spotgroup_statistic()
655 data->case_vector[ base_idx ] = CASE_MISMATCH; in extract_spotgroup_statistic()
679 uint8_t * loc_case_vector = data->case_vector + ( n_bases - 1 ); in extract_spotgroup_statistic()
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H A Dstat_mod_2.h113 uint8_t *case_vector; member
H A Dstat_mod.h104 uint8_t *case_vector; member
H A Dstat_mod_1.h110 uint8_t *case_vector; member
/dports/lang/clisp/clisp-df3b9f6fdcff22832898e89a989eb499c0f842ed/src/
H A Dspvw_global_old.d467 case_vector: in init_mem_heaptypes()
H A Dspvw_global.d520 case_vector: in init_mem_heaptypes()
H A Dhashtabl.d990 case_vector: { /* (VECTOR T), (VECTOR NIL) */ in hashcode4_atom()
H A Dpredtype.d968 case_vector: /* (VECTOR T) */ in equalp()
H A Dlispbibl.d7112 #define case_vector case_svector: case_ovector /* general vector */ macro
7113 …2vector: case_b4vector: case_b8vector: case_b16vector: case_b32vector: case_vector: case_mdarray /…
11203 case Rectype_Svector: case Rectype_vector: goto case_vector;
H A Dio.d6814 case_vector: /* (vector t) */ in prin_object_dispatch_low()