/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/mason2/example/ |
H A D | adeno_virus_b.gff | 1 NC_001405 NCBI cds 559 1542 . + . ID=cds.1;Alias=GENE:E1a,LocusTag:HAdVCgp01,GeneID:2652980;Dbxref=… 2 NC_001405 NCBI cds 559 1542 . + . ID=cds.2;Alias=GENE:E1a,LocusTag:HAdVCgp01,GeneID:2652980;Dbxref=… 3 NC_001405 NCBI cds 559 1315 . + . ID=cds.3;Alias=GENE:E1a,LocusTag:HAdVCgp01,GeneID:2652980;Dbxref=… 4 NC_001405 NCBI cds 1711 2238 . + . ID=cds.4;Alias=GENE:E1b_1,LocusTag:HAdVCgp02,GeneID:2652981;Dbxr… 6 NC_001405 NCBI cds 2016 3503 . + . ID=cds.6;Alias=GENE:E1b_1,LocusTag:HAdVCgp02,GeneID:2652981;Dbxr… 9 NC_001405 NCBI cds 4081 5708 . - . ID=cds.9;Alias=GENE:IVa2;Dbxref=NCBI_PID:NP_040515.1,NCBI_GI:962… 10 NC_001405 NCBI cds 5187 8357 . - . ID=cds.10;Alias=GENE:DNA polymerase;Dbxref=NCBI_PID:NP_040516.1,… 11 NC_001405 NCBI cds 7968 8417 . + . ID=cds.11;Alias=GENE:L1,LocusTag:HAdVCgp12,GeneID:2652993;Dbxref… 17 NC_001405 NCBI cds 15873 16469 . + . ID=cds.17;Alias=GENE:Pro-VII;Dbxref=NCBI_PID:NP_040522.1,NCBI_… 22 NC_001405 NCBI cds 22490 24079 . - . ID=cds.22;Alias=GENE:DBP;Dbxref=NCBI_PID:NP_040527.1,NCBI_GI:9… [all …]
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/dports/games/gnubik/gnubik-2.4.3/src/ |
H A D | colour-dialog.c | 125 update_radio_buttons (cds); in select_swatch() 242 update_radio_buttons (cds); in choose_image() 283 update_radio_buttons (cds); in set_plain() 293 struct colour_dialog_state *cds = g_malloc (sizeof *cds); in colour_select_menu() local 329 cds->button_mosaic = in colour_select_menu() 339 cds->button_plain = in colour_select_menu() 349 cds); in colour_select_menu() 350 g_signal_connect (cds->button_tile, "toggled", G_CALLBACK (set_tiled), cds); in colour_select_menu() 352 cds); in colour_select_menu() 354 cds->button_group = in colour_select_menu() [all …]
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/dports/www/mattermost-server/mattermost-server-6.0.2/app/ |
H A D | cluster_discovery.go | 37 func (cds *ClusterDiscoveryService) Start() { 38 err := cds.srv.Store.ClusterDiscovery().Cleanup() 43 exists, err := cds.srv.Store.ClusterDiscovery().Exists(&cds.ClusterDiscovery) 47 if _, err := cds.srv.Store.ClusterDiscovery().Delete(&cds.ClusterDiscovery); err != nil { 52 if err := cds.srv.Store.ClusterDiscovery().Save(&cds.ClusterDiscovery); err != nil { 58 …mlog.Debug("ClusterDiscoveryService ping writer started", mlog.String("ClusterDiscoveryID", cds.Cl… 62 if _, err := cds.srv.Store.ClusterDiscovery().Delete(&cds.ClusterDiscovery); err != nil { 71 if err := cds.srv.Store.ClusterDiscovery().SetLastPingAt(&cds.ClusterDiscovery); err != nil { 74 case <-cds.stop: 81 func (cds *ClusterDiscoveryService) Stop() { [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/unit_test/ |
H A D | unit_test_cds_fix.cpp | 210 cds->ResetComment(); in OneTerminalTranslationExceptionTest() 506 cds->SetData().SetCdregion(); in BOOST_AUTO_TEST_CASE() 543 cds->SetData().SetCdregion(); in BOOST_AUTO_TEST_CASE() 554 cds->SetLocation().SetInt().SetTo(15); in BOOST_AUTO_TEST_CASE() 563 cds->SetLocation().SetInt().SetTo(15); in BOOST_AUTO_TEST_CASE() 576 CRef<CSeq_feat> cds(new CSeq_feat()); in BOOST_AUTO_TEST_CASE() local 577 cds->SetData().SetCdregion(); in BOOST_AUTO_TEST_CASE() 880 cds->ResetComment(); in BOOST_AUTO_TEST_CASE() 881 cds->SetData().SetCdregion(); in BOOST_AUTO_TEST_CASE() 897 fh = scope.GetSeq_featHandle(*cds); in BOOST_AUTO_TEST_CASE() [all …]
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H A D | unit_test_loc_edit.cpp | 1664 Check5Policy(*cds, scope, in Check5Policy() 1668 Check5Policy(*cds, scope, in Check5Policy() 1672 Check5Policy(*cds, scope, in Check5Policy() 1676 Check5Policy(*cds, scope, in Check5Policy() 1681 Check5Policy(*cds, scope, in Check5Policy() 1685 Check5Policy(*cds, scope, in Check5Policy() 1689 Check5Policy(*cds, scope, in Check5Policy() 1694 Check5Policy(*cds, scope, in Check5Policy() 1706 Check5Policy(*cds, scope, in Check5Policy() 1813 Check3Policy(*cds, scope, in Check3Policy() [all …]
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/dports/databases/p5-DBIx-Class/DBIx-Class-0.082842/t/prefetch/ |
H A D | count.t | 27 {prefetch=>'cds', join => 'twokeys' } 45 my $cd2 = $artist->create_related ('cds', { 52 ->search_related ('cds'); 58 is($cds->count, 2, "2 CDs counted on artist via one of the cds"); 59 is(scalar($cds->all), 2, "2 CD objectson artist via one of the cds"); 68 JOIN cd cds ON cds.artist = me.artistid 80 …my $cds = $cd2->search_related ('artist', {}, { prefetch => { cds => 'tracks' }, join => 'twokeys'… 81 ->search_related ('cds'); 89 is($cds->count, 2, "2 CDs counted on artist via one of the cds"); 90 is(scalar($cds->all), 2, "2 CDs prefetched on artist via one of the cds"); [all …]
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/dports/databases/p5-DBIx-Class/DBIx-Class-0.082842/t/ |
H A D | 83cache.t | 50 join => [ qw/ cds /], 51 prefetch => [qw/ cds /], 60 join => [ qw/ cds /], 61 prefetch => [qw/ cds /], 77 is( scalar ($artist->cds), 3, 'artist->cds returns correct number of objects' ); 80 is( $artist->cds->count, 3, 'artist->cds->count returns correct value' ); 100 cds => 'tags' 113 is($artist->cds, 0, 'No cds for this artist'); 123 my $cds = $artist->cds; 131 $tags = $cds->next->tags; [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/structure/cd_utils/ |
H A D | cuCdFamily.cpp | 141 getChildren(cds, pit); in getChildren() 180 cds.clear(); in getDescendants() 189 vector<CCdCore*> cds; in subfamily() local 190 cds.push_back(cit->cd); in subfamily() 216 if (find(cds.begin(), cds.end(), fit->cd) != cds.end()) in selectCDs() 238 return cds.size(); in getSelectedCDs() 252 return cds.size(); in getAllCD() 341 if (cds.size() == 0) in convergeTo() 497 cds.clear(); in extractFamily() 518 if (cds[i] != cd) in findParent() [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/ |
H A D | cds_fix.cpp | 112 if (!cds.IsSetData() || !cds.GetData().IsCdregion()) { in GetLastPartialCodonLength() 307 if (!cds.IsSetData() || !cds.GetData().IsCdregion()) { in SetTranslExcept() 342 if (cds.IsSetComment() && !NStr::IsBlank(cds.GetComment())) { in SetTranslExcept() 345 cds.SetComment(cds.GetComment() + ";" + comment); in SetTranslExcept() 674 if (cds.IsSetXref()) { in GetmRNAforCDS() 849 if (cds.IsSetData() && cds.GetData().IsCdregion() && cds.GetData().GetCdregion().IsSetCode()) { in ExtendCDSToStopCodon() 857 if (cds.IsSetData() && cds.GetData().IsCdregion() && cds.GetData().GetCdregion().IsSetFrame()) { in ExtendCDSToStopCodon() 964 if (cds.IsSetFrame() && cds.GetFrame() != CCdregion::eFrame_not_set) { in AdjustCDSFrameForStartChange() 1030 if (!cds.IsSetData() || !cds.GetData().IsCdregion()) in s_SetCDSFrame() 1071 …if (!cds.IsSetData() || !cds.GetData().IsCdregion() || !cds.IsSetLocation() || !cds.IsSetProduct()… in s_FindMatchingFrame() [all …]
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/ |
H A D | cds_fix.cpp | 112 if (!cds.IsSetData() || !cds.GetData().IsCdregion()) { in GetLastPartialCodonLength() 307 if (!cds.IsSetData() || !cds.GetData().IsCdregion()) { in SetTranslExcept() 342 if (cds.IsSetComment() && !NStr::IsBlank(cds.GetComment())) { in SetTranslExcept() 345 cds.SetComment(cds.GetComment() + ";" + comment); in SetTranslExcept() 674 if (cds.IsSetXref()) { in GetmRNAforCDS() 849 if (cds.IsSetData() && cds.GetData().IsCdregion() && cds.GetData().GetCdregion().IsSetCode()) { in ExtendCDSToStopCodon() 857 if (cds.IsSetData() && cds.GetData().IsCdregion() && cds.GetData().GetCdregion().IsSetFrame()) { in ExtendCDSToStopCodon() 964 if (cds.IsSetFrame() && cds.GetFrame() != CCdregion::eFrame_not_set) { in AdjustCDSFrameForStartChange() 1030 if (!cds.IsSetData() || !cds.GetData().IsCdregion()) in s_SetCDSFrame() 1071 …if (!cds.IsSetData() || !cds.GetData().IsCdregion() || !cds.IsSetLocation() || !cds.IsSetProduct()… in s_FindMatchingFrame() [all …]
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/dports/emulators/qemu42/qemu-4.2.1/include/hw/s390x/ |
H A D | css.h | 137 CcwDataStream cds; member 297 cds->at_byte = 0; in ccw_dstream_rewind() 298 cds->at_idaw = 0; in ccw_dstream_rewind() 299 cds->cda = cds->cda_orig; in ccw_dstream_rewind() 309 return cds->count - cds->at_byte; in ccw_dstream_residual_count() 314 return ccw_dstream_good(cds) ? ccw_dstream_residual_count(cds) : 0; in ccw_dstream_avail() 319 return cds->op_handler(cds, NULL, len, CDS_OP_A); in ccw_dstream_advance() 324 return cds->op_handler(cds, buff, len, CDS_OP_W); in ccw_dstream_write_buf() 329 return cds->op_handler(cds, buff, len, CDS_OP_R); in ccw_dstream_read_buf() 332 #define ccw_dstream_read(cds, v) ccw_dstream_read_buf((cds), &(v), sizeof(v)) argument [all …]
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/dports/emulators/qemu60/qemu-6.0.0/include/hw/s390x/ |
H A D | css.h | 136 CcwDataStream cds; member 292 cds->at_byte = 0; in ccw_dstream_rewind() 293 cds->at_idaw = 0; in ccw_dstream_rewind() 294 cds->cda = cds->cda_orig; in ccw_dstream_rewind() 304 return cds->count - cds->at_byte; in ccw_dstream_residual_count() 309 return ccw_dstream_good(cds) ? ccw_dstream_residual_count(cds) : 0; in ccw_dstream_avail() 314 return cds->op_handler(cds, NULL, len, CDS_OP_A); in ccw_dstream_advance() 319 return cds->op_handler(cds, buff, len, CDS_OP_W); in ccw_dstream_write_buf() 324 return cds->op_handler(cds, buff, len, CDS_OP_R); in ccw_dstream_read_buf() 327 #define ccw_dstream_read(cds, v) ccw_dstream_read_buf((cds), &(v), sizeof(v)) argument [all …]
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/dports/emulators/qemu-utils/qemu-4.2.1/include/hw/s390x/ |
H A D | css.h | 137 CcwDataStream cds; member 297 cds->at_byte = 0; in ccw_dstream_rewind() 298 cds->at_idaw = 0; in ccw_dstream_rewind() 299 cds->cda = cds->cda_orig; in ccw_dstream_rewind() 309 return cds->count - cds->at_byte; in ccw_dstream_residual_count() 314 return ccw_dstream_good(cds) ? ccw_dstream_residual_count(cds) : 0; in ccw_dstream_avail() 319 return cds->op_handler(cds, NULL, len, CDS_OP_A); in ccw_dstream_advance() 324 return cds->op_handler(cds, buff, len, CDS_OP_W); in ccw_dstream_write_buf() 329 return cds->op_handler(cds, buff, len, CDS_OP_R); in ccw_dstream_read_buf() 332 #define ccw_dstream_read(cds, v) ccw_dstream_read_buf((cds), &(v), sizeof(v)) argument [all …]
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/dports/emulators/qemu-powernv/qemu-powernv-3.0.50/include/hw/s390x/ |
H A D | css.h | 135 CcwDataStream cds; member 292 cds->at_byte = 0; in ccw_dstream_rewind() 293 cds->at_idaw = 0; in ccw_dstream_rewind() 294 cds->cda = cds->cda_orig; in ccw_dstream_rewind() 304 return cds->count - cds->at_byte; in ccw_dstream_residual_count() 309 return ccw_dstream_good(cds) ? ccw_dstream_residual_count(cds) : 0; in ccw_dstream_avail() 314 return cds->op_handler(cds, NULL, len, CDS_OP_A); in ccw_dstream_advance() 319 return cds->op_handler(cds, buff, len, CDS_OP_W); in ccw_dstream_write_buf() 324 return cds->op_handler(cds, buff, len, CDS_OP_R); in ccw_dstream_read_buf() 327 #define ccw_dstream_read(cds, v) ccw_dstream_read_buf((cds), &(v), sizeof(v)) argument [all …]
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/dports/emulators/qemu-guest-agent/qemu-5.0.1/include/hw/s390x/ |
H A D | css.h | 137 CcwDataStream cds; member 297 cds->at_byte = 0; in ccw_dstream_rewind() 298 cds->at_idaw = 0; in ccw_dstream_rewind() 299 cds->cda = cds->cda_orig; in ccw_dstream_rewind() 309 return cds->count - cds->at_byte; in ccw_dstream_residual_count() 314 return ccw_dstream_good(cds) ? ccw_dstream_residual_count(cds) : 0; in ccw_dstream_avail() 319 return cds->op_handler(cds, NULL, len, CDS_OP_A); in ccw_dstream_advance() 324 return cds->op_handler(cds, buff, len, CDS_OP_W); in ccw_dstream_write_buf() 329 return cds->op_handler(cds, buff, len, CDS_OP_R); in ccw_dstream_read_buf() 332 #define ccw_dstream_read(cds, v) ccw_dstream_read_buf((cds), &(v), sizeof(v)) argument [all …]
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/dports/emulators/qemu-cheri/qemu-0a323821042c36e21ea80e58b9545dfc3b0cb8ef/include/hw/s390x/ |
H A D | css.h | 137 CcwDataStream cds; member 297 cds->at_byte = 0; in ccw_dstream_rewind() 298 cds->at_idaw = 0; in ccw_dstream_rewind() 299 cds->cda = cds->cda_orig; in ccw_dstream_rewind() 309 return cds->count - cds->at_byte; in ccw_dstream_residual_count() 314 return ccw_dstream_good(cds) ? ccw_dstream_residual_count(cds) : 0; in ccw_dstream_avail() 319 return cds->op_handler(cds, NULL, len, CDS_OP_A); in ccw_dstream_advance() 324 return cds->op_handler(cds, buff, len, CDS_OP_W); in ccw_dstream_write_buf() 329 return cds->op_handler(cds, buff, len, CDS_OP_R); in ccw_dstream_read_buf() 332 #define ccw_dstream_read(cds, v) ccw_dstream_read_buf((cds), &(v), sizeof(v)) argument [all …]
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/dports/biology/p5-transdecoder/TransDecoder-TransDecoder-v5.4.0/PerlLib/ |
H A D | GTF.pm | 185 push @$cds, @{$gene->cds}; 220 push @cds, @{$gene->cds}; 870 my $cds = $tx->cds; 1096 my $cds = $tx->cds; 1497 my $cds = $tx->cds; 1605 my $cds = $tx->cds; 2025 my $cds = $tx->cds; 3509 my $cds = $tx->cds; 3540 my $cds = $tx->cds; 3633 my $cds = $tx->cds; [all …]
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/dports/audio/xmcd/xmcd-3.3.2/cdda_d/ |
H A D | rd_sol.c | 108 sol_rcd->cds->chunk_blocks + sol_rcd->cds->olap_blocks; in solcd_read_fillbuf() 122 sol_rcd->cds->chunk_bytes + in solcd_read_fillbuf() 123 (sol_rcd->cds->olap_bytes << 1) in solcd_read_fillbuf() 193 sol_rcd->cds->search_bytes << 1 in solcd_read_fillbuf() 203 sol_rcd->cds->chunk_bytes in solcd_read_fillbuf() 284 sol_rcd->cds->chunk_blocks + sol_rcd->cds->olap_blocks; in solcd_read_cont() 297 sol_rcd->cds->chunk_bytes + in solcd_read_cont() 298 (sol_rcd->cds->olap_bytes << 1) in solcd_read_cont() 398 sol_rcd->cds->chunk_bytes in solcd_read_cont() 493 sol_rcd->cds->chunk_blocks, in sol_read() [all …]
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H A D | rd_fbsd.c | 101 fb_rcd->cds->chunk_blocks + fb_rcd->cds->olap_blocks; in fbcd_read_fillbuf() 114 fb_rcd->cds->chunk_bytes + in fbcd_read_fillbuf() 115 (fb_rcd->cds->olap_bytes << 1) in fbcd_read_fillbuf() 186 fb_rcd->cds->search_bytes << 1 in fbcd_read_fillbuf() 196 fb_rcd->cds->chunk_bytes in fbcd_read_fillbuf() 277 fb_rcd->cds->chunk_blocks + fb_rcd->cds->olap_blocks; in fbcd_read_cont() 290 fb_rcd->cds->chunk_bytes + in fbcd_read_cont() 291 (fb_rcd->cds->olap_bytes << 1) in fbcd_read_cont() 362 fb_rcd->cds->search_bytes << 1 in fbcd_read_cont() 389 fb_rcd->cds->chunk_bytes in fbcd_read_cont() [all …]
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H A D | rd_linux.c | 101 lx_rcd->cds->chunk_blocks + lx_rcd->cds->olap_blocks; in lxcd_read_fillbuf() 114 lx_rcd->cds->chunk_bytes + in lxcd_read_fillbuf() 115 (lx_rcd->cds->olap_bytes << 1) in lxcd_read_fillbuf() 188 lx_rcd->cds->search_bytes << 1 in lxcd_read_fillbuf() 198 lx_rcd->cds->chunk_bytes in lxcd_read_fillbuf() 278 lx_rcd->cds->chunk_blocks + lx_rcd->cds->olap_blocks; in lxcd_read_cont() 291 lx_rcd->cds->chunk_bytes + in lxcd_read_cont() 292 (lx_rcd->cds->olap_bytes << 1) in lxcd_read_cont() 365 lx_rcd->cds->search_bytes << 1 in lxcd_read_cont() 392 lx_rcd->cds->chunk_bytes in lxcd_read_cont() [all …]
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/dports/databases/p5-DBIx-Class/DBIx-Class-0.082842/t/count/ |
H A D | count_rs.t | 84 SELECT cds.cdid 86 JOIN cd cds ON cds.artist = me.artistid 90 GROUP BY cds.cdid 91 ) cds 102 SELECT cds.cdid 104 JOIN cd cds ON cds.artist = me.artistid 108 GROUP BY cds.cdid 110 ) cds 122 join => 'cds', 138 LEFT JOIN cd cds ON cds.artist = me.artistid [all …]
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/dports/emulators/qemu/qemu-6.2.0/include/hw/s390x/ |
H A D | css.h | 136 CcwDataStream cds; member 298 cds->at_byte = 0; in ccw_dstream_rewind() 299 cds->at_idaw = 0; in ccw_dstream_rewind() 300 cds->cda = cds->cda_orig; in ccw_dstream_rewind() 310 return cds->count - cds->at_byte; in ccw_dstream_residual_count() 315 return ccw_dstream_good(cds) ? ccw_dstream_residual_count(cds) : 0; in ccw_dstream_avail() 320 return cds->op_handler(cds, NULL, len, CDS_OP_A); in ccw_dstream_advance() 325 return cds->op_handler(cds, buff, len, CDS_OP_W); in ccw_dstream_write_buf() 330 return cds->op_handler(cds, buff, len, CDS_OP_R); in ccw_dstream_read_buf() 333 #define ccw_dstream_read(cds, v) ccw_dstream_read_buf((cds), &(v), sizeof(v)) argument [all …]
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/dports/emulators/qemu5/qemu-5.2.0/include/hw/s390x/ |
H A D | css.h | 137 CcwDataStream cds; member 299 cds->at_byte = 0; in ccw_dstream_rewind() 300 cds->at_idaw = 0; in ccw_dstream_rewind() 301 cds->cda = cds->cda_orig; in ccw_dstream_rewind() 311 return cds->count - cds->at_byte; in ccw_dstream_residual_count() 316 return ccw_dstream_good(cds) ? ccw_dstream_residual_count(cds) : 0; in ccw_dstream_avail() 321 return cds->op_handler(cds, NULL, len, CDS_OP_A); in ccw_dstream_advance() 326 return cds->op_handler(cds, buff, len, CDS_OP_W); in ccw_dstream_write_buf() 331 return cds->op_handler(cds, buff, len, CDS_OP_R); in ccw_dstream_read_buf() 334 #define ccw_dstream_read(cds, v) ccw_dstream_read_buf((cds), &(v), sizeof(v)) argument [all …]
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/dports/emulators/qemu-devel/qemu-de8ed1055c2ce18c95f597eb10df360dcb534f99/include/hw/s390x/ |
H A D | css.h | 136 CcwDataStream cds; member 298 cds->at_byte = 0; in ccw_dstream_rewind() 299 cds->at_idaw = 0; in ccw_dstream_rewind() 300 cds->cda = cds->cda_orig; in ccw_dstream_rewind() 310 return cds->count - cds->at_byte; in ccw_dstream_residual_count() 315 return ccw_dstream_good(cds) ? ccw_dstream_residual_count(cds) : 0; in ccw_dstream_avail() 320 return cds->op_handler(cds, NULL, len, CDS_OP_A); in ccw_dstream_advance() 325 return cds->op_handler(cds, buff, len, CDS_OP_W); in ccw_dstream_write_buf() 330 return cds->op_handler(cds, buff, len, CDS_OP_R); in ccw_dstream_read_buf() 333 #define ccw_dstream_read(cds, v) ccw_dstream_read_buf((cds), &(v), sizeof(v)) argument [all …]
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/dports/dns/bind9-devel/bind9-e112afa15668bd3b1baed59df2d21e01b46da15e/bin/tests/system/cds/ |
H A D | setup.sh | 18 Z=cds.test 104 cat sig.null CDS.1 >brk.unsigned-cds 106 cat db.null CDS.1 | sign cds.1 107 cat db.null CDS.2 | sign cds.2 108 cat db.null CDS.1 CDS.2 | sign cds.both 110 tac <sig.cds.1 >sig.cds.rev1 116 cat db.null CDS.2-1 | sign cds.2.sha1 120 <sig.cds.1 >brk.rrsig.cds.zsk 122 <sig.cds.1 >brk.rrsig.cds.ksk 124 $mangle " IN CDS $id1 8 1 " <db.cds.1 | [all …]
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