Searched refs:ci_total (Results 1 – 6 of 6) sorted by relevance
/dports/biology/gemma/GEMMA-0.98.3/src/ |
H A D | prdt.cpp | 323 size_t n_bit, n_miss, ci_total, ci_test, n_train_nomiss; in AnalyzePlink() local 362 ci_total = 0; in AnalyzePlink() 372 if ((i == (n_bit - 1)) && ci_total == indicator_idv.size()) { in AnalyzePlink() 375 if (indicator_idv[ci_total] == 1) { in AnalyzePlink() 409 ci_total++; in AnalyzePlink()
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H A D | lm.cpp | 512 int n_bit, n_miss, ci_total, ci_test; in AnalyzePlink() local 562 ci_total = 0; in AnalyzePlink() 570 if ((i == (n_bit - 1)) && ci_total == (int)ni_total) { in AnalyzePlink() 573 if (indicator_idv[ci_total] == 0) { in AnalyzePlink() 574 ci_total++; in AnalyzePlink() 595 ci_total++; in AnalyzePlink()
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H A D | lmm.cpp | 1716 int n_bit, n_miss, ci_total, ci_test; in AnalyzePlink() local 1769 ci_total = 0; in AnalyzePlink() 1777 if ((i == (n_bit - 1)) && ci_total == (int)ni_total) { in AnalyzePlink() 1780 if (indicator_idv[ci_total] == 0) { in AnalyzePlink() 1781 ci_total++; in AnalyzePlink() 1802 ci_total++; in AnalyzePlink() 2397 int n_bit, n_miss, ci_total, ci_test; in AnalyzePlinkGXE() local 2443 ci_total = 0; in AnalyzePlinkGXE() 2454 if (indicator_idv[ci_total] == 0) { in AnalyzePlinkGXE() 2455 ci_total++; in AnalyzePlinkGXE() [all …]
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H A D | gemma_io.cpp | 1595 size_t n_miss, ci_total; in PlinkKin() local 1636 ci_total = 0; in PlinkKin() 1650 gsl_vector_set(geno, ci_total, 2.0); in PlinkKin() 1654 gsl_vector_set(geno, ci_total, 1.0); in PlinkKin() 1660 gsl_vector_set(geno, ci_total, 0.0); in PlinkKin() 1667 ci_total++; in PlinkKin() 2947 size_t n_miss, ci_total, ci_test; in PlinkKin() local 3009 ci_total = 0; in PlinkKin() 3021 if (indicator_idv[ci_total] == 0) { in PlinkKin() 3022 ci_total++; in PlinkKin() [all …]
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H A D | vc.cpp | 2328 size_t n_miss, ci_total, ci_test; in PlinkXwz() local 2367 ci_total = 0; in PlinkXwz() 2376 if ((i == (n_bit - 1)) && ci_total == ni_total) { in PlinkXwz() 2379 if (indicator_idv[ci_total] == 0) { in PlinkXwz() 2380 ci_total++; in PlinkXwz() 2404 ci_total++; in PlinkXwz() 2581 size_t n_miss, ci_total, ci_test; in PlinkXtXwz() local 2617 ci_total = 0; in PlinkXtXwz() 2629 if (indicator_idv[ci_total] == 0) { in PlinkXtXwz() 2630 ci_total++; in PlinkXtXwz() [all …]
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H A D | mvlmm.cpp | 3428 int n_bit, n_miss, ci_total, ci_test; in AnalyzePlink() local 3682 ci_total = 0; in AnalyzePlink() 3690 if ((i == (n_bit - 1)) && ci_total == (int)ni_total) { in AnalyzePlink() 3693 if (indicator_idv[ci_total] == 0) { in AnalyzePlink() 3694 ci_total++; in AnalyzePlink() 3715 ci_total++; in AnalyzePlink() 4421 int n_bit, n_miss, ci_total, ci_test; in AnalyzePlinkGXE() local 4667 ci_total = 0; in AnalyzePlinkGXE() 4679 if (indicator_idv[ci_total] == 0) { in AnalyzePlinkGXE() 4680 ci_total++; in AnalyzePlinkGXE() [all …]
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