Searched refs:clInvar (Results 1 – 3 of 3) sorted by relevance
5730 clInvar = m->invCondLikes; in Likelihood_Gen()6043 clInvar += nStates; in Likelihood_Gen_SSE()6109 clInvar = m->invCondLikes; in Likelihood_Gen_GibbsGamma()6315 …likeI = (clInvar[A] * bs[A] + clInvar[C] * bs[C] + clInvar[G] * bs[G] + clInvar[T] * bs[T]) * pInv… in Likelihood_NUC4()6332 clInvar += 4; in Likelihood_NUC4()6371 clInvar = m->invCondLikes; in Likelihood_NUC4_GibbsGamma()6425 … like = (clInvar[A] * bs[A] + clInvar[C] * bs[C] + clInvar[G] * bs[G] + clInvar[T] * bs[T]); in Likelihood_NUC4_GibbsGamma()6426 clInvar += 4; in Likelihood_NUC4_GibbsGamma()6686 clInvar += 4; in Likelihood_NUC4_FMA()6858 clInvar += 4; in Likelihood_NUC4_AVX()[all …]
5364 clInvar = m->invCondLikes; in GibbsSampleGamma()5419 clInvar += nStates; in GibbsSampleGamma()10773 clInvar = m->invCondLikes; in PrintAncStates_Gen()10808 clInvar += nStates; in PrintAncStates_Gen()10850 sum += clInvar[i]; in PrintAncStates_Gen()10866 clInvar += nStates; in PrintAncStates_Gen()10948 clInvar = m->invCondLikes; in PrintAncStates_NUC4()10997 clInvar += 4; in PrintAncStates_NUC4()11029 sum = clInvar[A] + clInvar[C] + clInvar[G] + clInvar[T]; in PrintAncStates_NUC4()11049 clInvar += 4; in PrintAncStates_NUC4()[all …]
1125 CLFlt *clInvar=NULL, *nSitesOfPat; in TreeLikelihood_Beagle() local1151 clInvar = m->invCondLikes; in TreeLikelihood_Beagle()1340 likeI += (*(clInvar++)) * bs[j]; in TreeLikelihood_Beagle()2621 CLFlt *clInvar=NULL, *nSitesOfPat; in TreeLikelihood_BeagleMultiPartition() local2933 clInvar = m->invCondLikes; in TreeLikelihood_BeagleMultiPartition()2963 likeI += (*(clInvar++)) * bs[j]; in TreeLikelihood_BeagleMultiPartition()