Searched refs:clade_list_size (Results 1 – 8 of 8) sorted by relevance
2348 cal->clade_list_size = 0; in XML_Read_Calibration()2423 … if(cal->clade_list_size == 0) cal->clade_list = (t_clad **)mCalloc(1,sizeof(t_clad *)); in XML_Read_Calibration()2424 …else cal->clade_list = (t_clad **)mRealloc(cal->clade_list,cal->clade_list_size+1,sizeof(t_clad *)… in XML_Read_Calibration()2425 … if(cal->clade_list_size == 0) cal->alpha_proba_list = (phydbl *)mCalloc(1,sizeof(phydbl)); in XML_Read_Calibration()2428 cal->clade_list[cal->clade_list_size] = clade; in XML_Read_Calibration()2429 cal->alpha_proba_list[cal->clade_list_size] = alpha_proba_dbl; in XML_Read_Calibration()2430 cal->clade_list_size++; in XML_Read_Calibration()2468 for(j=0;j<cal->clade_list_size;j++) sum += cal->alpha_proba_list[j]; in XML_Read_Calibration()2469 for(j=0;j<cal->clade_list_size;j++) cal->alpha_proba_list[j] /= sum; in XML_Read_Calibration()2471 for(j=0;j<cal->clade_list_size;j++) in XML_Read_Calibration()[all …]
845 for(j=0;j<cal->clade_list_size;++j) in DATE_MCMC()1032 for(j=0;j<cal->clade_list_size;++j) in DATE_MCMC()
1335 for(i=0;i<cal->clade_list_size;i++) Free(cal->clade_list[i]); in Free_Calib()
1884 int clade_list_size; member
11914 to->clade_list_size = from->clade_list_size; in Duplicate_Calib()11919 to->alpha_proba_list = (phydbl *)mCalloc(from->clade_list_size,sizeof(phydbl)); in Duplicate_Calib()11920 to->clade_list = (t_clad **)mCalloc(from->clade_list_size,sizeof(t_clad *)); in Duplicate_Calib()11922 for(i=0;i<from->clade_list_size;++i) in Duplicate_Calib()
3637 cal->clade_list_size = 0; in Init_Calibration()
637 for(j=0;j<from->times->a_cal[i]->clade_list_size;j++) in RATES_Duplicate_Calib_Struct()
4348 for(int j=0;j<cal->clade_list_size;++j) in MCMC_Death_Rate()4718 new_clade_idx = Rand_Int(0,cal->clade_list_size-1); in MCMC_Clade_Change()