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Searched refs:compMatrixRowSize (Results 1 – 3 of 3) sorted by relevance

/dports/biology/mrbayes/MrBayes-3.2.7/src/
H A Dbayes.h1590 extern int compMatrixRowSize; /* row size of compressed matrix …
H A Dmcmc.c267 int compMatrixRowSize; /* row size of compressed matrix */ variable
6976 x = compMatrix[pos(i,j,compMatrixRowSize)]; in InitParsSets()
6995 x = compMatrix[pos(i,j,compMatrixRowSize)]; in InitParsSets()
7012 x1 = compMatrix[pos(i,j,compMatrixRowSize)]; in InitParsSets()
7015 x2 = compMatrix[pos(i,j+1,compMatrixRowSize)]; in InitParsSets()
7041 x1 = compMatrix[pos(i,j,compMatrixRowSize)]; in InitParsSets()
7044 x2 = compMatrix[pos(i,j+1,compMatrixRowSize)]; in InitParsSets()
7047 x3 = compMatrix[pos(i,j+2,compMatrixRowSize)]; in InitParsSets()
7077 x1 = compMatrix[pos(i,j,compMatrixRowSize)]; in InitParsSets()
7080 x2 = compMatrix[pos(i,j+1,compMatrixRowSize)]; in InitParsSets()
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H A Dmodel.c239 oldRowSize = compMatrixRowSize; in AddDummyChars()
240 compMatrixRowSize += numDummyChars; in AddDummyChars()
241 newRowSize = compMatrixRowSize; in AddDummyChars()
247 tempChar = (int *) SafeCalloc (compMatrixRowSize, sizeof(int)); in AddDummyChars()
426 compMatrixRowSize -= numDeleted; in AddDummyChars()
2571 compMatrixRowSize = newColumn; in CompressData()
2608 origChar = (int *)SafeMalloc((size_t)compMatrixRowSize * sizeof(int)); in CompressData()
2618 for (j=0; j<compMatrixRowSize; j++) in CompressData()
2619 compMatrix[pos(i,j,compMatrixRowSize)] = tempMatrix[pos(i,j,numLocalChar)]; in CompressData()
2624 for (i=0; i<compMatrixRowSize; i++) in CompressData()
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