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Searched refs:covar_ID (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gcta/gcta_1.26.0_src/
H A Dmlm_assoc.cpp30 vector<string> phen_ID, qcovar_ID, covar_ID, grm_id; in mlma() local
41 covar_num=read_covar(covar_file, covar_ID, covar, false); in mlma()
42 update_id_map_kp(covar_ID, _id_map, _keep); in mlma()
174 …map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, covar_num, covar_ID, covar, E_float, … in mlma()
356 vector<string> phen_ID, qcovar_ID, covar_ID, grm_id; in mlma_loco() local
366 covar_num=read_covar(covar_file, covar_ID, covar, false); in mlma_loco()
367 update_id_map_kp(covar_ID, _id_map, _keep); in mlma_loco()
426 …map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, covar_num, covar_ID, covar, E_float, … in mlma_loco()
H A Dest_hsq.cpp105 int gcta::read_covar(string covar_file, vector<string> &covar_ID, vector< vector<string> > &covar, … in read_covar() argument
113 covar_ID.clear(); in read_covar()
117 covar_num = read_fac(in_covar, covar_ID, covar); in read_covar()
118 …if (qcovar_flag) cout << covar_num << " quantitative covariate(s) of " << covar_ID.size() << " ind… in read_covar()
119 …else cout << covar_num << " discrete covariate(s) of " << covar_ID.size() << " individuals are inc… in read_covar()
187 vector<string> phen_ID, qcovar_ID, covar_ID, qGE_ID, GE_ID, grm_id, grm_files; in fit_reml() local
209 covar_num = read_covar(covar_file, covar_ID, covar, false); in fit_reml()
210 update_id_map_kp(covar_ID, _id_map, _keep); in fit_reml()
379 …map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, covar_num, covar_ID, covar, E_float, … in fit_reml()
465 for (i = 0; i < covar_ID.size(); i++) { in construct_X()
[all …]
H A Dbivar_reml.cpp31 vector<string> phen_ID, qcovar_ID, covar_ID, grm_id, grm_files; in fit_bivar_reml() local
53 covar_num = read_covar(covar_file, covar_ID, covar, false); in fit_bivar_reml()
54 update_id_map_kp(covar_ID, _id_map, _keep); in fit_bivar_reml()
264 …map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, covar_num, covar_ID, covar, E_float, … in fit_bivar_reml()
H A Dgcta.h235 …int read_covar(string covar_file, vector<string> &covar_ID, vector< vector<string> > &covar, bool …
241 …ctor<string> > &qcovar, bool covar_flag, int covar_num, vector<string> &covar_ID, vector< vector<s…