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Searched refs:cram_file_def (Results 1 – 25 of 32) sorted by relevance

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/dports/biology/vt/vt-0.57721/lib/htslib/htslib/
H A Dcram.h73 typedef struct cram_file_def cram_file_def; typedef
/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/htslib/
H A Dcram.h73 typedef struct cram_file_def cram_file_def; typedef
/dports/biology/stacks/stacks-2.4/htslib/htslib/
H A Dcram.h73 typedef struct cram_file_def cram_file_def; typedef
/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/htslib/
H A Dcram.h73 typedef struct cram_file_def cram_file_def; typedef
/dports/biology/py-pysam/pysam-0.18.0/htslib/cram/
H A Dcram_io.h508 cram_file_def *cram_read_file_def(cram_fd *fd);
516 int cram_write_file_def(cram_fd *fd, cram_file_def *def);
519 void cram_free_file_def(cram_file_def *def);
H A Dcram_structs.h200 struct cram_file_def { struct
776 cram_file_def *file_def;
/dports/biology/htslib/htslib-1.14/cram/
H A Dcram_io.h508 cram_file_def *cram_read_file_def(cram_fd *fd);
516 int cram_write_file_def(cram_fd *fd, cram_file_def *def);
519 void cram_free_file_def(cram_file_def *def);
H A Dcram_structs.h200 struct cram_file_def { struct
776 cram_file_def *file_def;
/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/
H A Dcram.h73 typedef struct cram_file_def cram_file_def; typedef
/dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/
H A Dcram.h92 typedef struct cram_file_def cram_file_def; typedef
/dports/biology/htslib/htslib-1.14/htslib/
H A Dcram.h92 typedef struct cram_file_def cram_file_def; typedef
/dports/biology/vt/vt-0.57721/lib/htslib/cram/
H A Dcram_structs.h182 typedef struct cram_file_def { struct
187 } cram_file_def; argument
681 cram_file_def *file_def;
H A Dcram_io.h775 cram_file_def *cram_read_file_def(cram_fd *fd);
783 int cram_write_file_def(cram_fd *fd, cram_file_def *def);
786 void cram_free_file_def(cram_file_def *def);
H A Dcram_io.c3548 cram_file_def *cram_read_file_def(cram_fd *fd) { in cram_read_file_def()
3549 cram_file_def *def = malloc(sizeof(*def)); in cram_read_file_def()
3581 int cram_write_file_def(cram_fd *fd, cram_file_def *def) { in cram_write_file_def()
3585 void cram_free_file_def(cram_file_def *def) { in cram_free_file_def()
4091 cram_file_def *def = calloc(1, sizeof(*def)); in cram_dopen()
/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/
H A Dcram_structs.h182 typedef struct cram_file_def { struct
187 } cram_file_def; argument
681 cram_file_def *file_def;
H A Dcram_io.h775 cram_file_def *cram_read_file_def(cram_fd *fd);
783 int cram_write_file_def(cram_fd *fd, cram_file_def *def);
786 void cram_free_file_def(cram_file_def *def);
/dports/biology/stacks/stacks-2.4/htslib/cram/
H A Dcram_structs.h182 typedef struct cram_file_def { struct
187 } cram_file_def; typedef
677 cram_file_def *file_def;
H A Dcram_io.h767 cram_file_def *cram_read_file_def(cram_fd *fd);
775 int cram_write_file_def(cram_fd *fd, cram_file_def *def);
778 void cram_free_file_def(cram_file_def *def);
/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/
H A Dcram_structs.h182 typedef struct cram_file_def { struct
187 } cram_file_def; argument
677 cram_file_def *file_def;
H A Dcram_io.h767 cram_file_def *cram_read_file_def(cram_fd *fd);
775 int cram_write_file_def(cram_fd *fd, cram_file_def *def);
778 void cram_free_file_def(cram_file_def *def);
/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/cram/
H A Dcram_io.h802 cram_file_def *cram_read_file_def(cram_fd *fd);
810 int cram_write_file_def(cram_fd *fd, cram_file_def *def);
813 void cram_free_file_def(cram_file_def *def);
H A Dcram_structs.h183 struct cram_file_def { struct
688 cram_file_def *file_def;
/dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/
H A Dcram_io.h731 cram_file_def *cram_read_file_def(cram_fd *fd);
739 int cram_write_file_def(cram_fd *fd, cram_file_def *def);
742 void cram_free_file_def(cram_file_def *def);
H A Dcram_structs.h175 } cram_file_def; typedef
764 cram_file_def *file_def;
H A Dcram_io.c4270 cram_file_def *cram_read_file_def(cram_fd *fd) { in cram_read_file_def()
4271 cram_file_def *def = malloc(sizeof(*def)); in cram_read_file_def()
4304 int cram_write_file_def(cram_fd *fd, cram_file_def *def) { in cram_write_file_def()
4308 void cram_free_file_def(cram_file_def *def) { in cram_free_file_def()
5002 cram_file_def def; in cram_open()
5231 cram_file_def def; in cram_openw_by_callbacks()

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