/dports/biology/vt/vt-0.57721/lib/htslib/htslib/ |
H A D | cram.h | 73 typedef struct cram_file_def cram_file_def; typedef
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/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/htslib/ |
H A D | cram.h | 73 typedef struct cram_file_def cram_file_def; typedef
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/dports/biology/stacks/stacks-2.4/htslib/htslib/ |
H A D | cram.h | 73 typedef struct cram_file_def cram_file_def; typedef
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/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/htslib/ |
H A D | cram.h | 73 typedef struct cram_file_def cram_file_def; typedef
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/dports/biology/py-pysam/pysam-0.18.0/htslib/cram/ |
H A D | cram_io.h | 508 cram_file_def *cram_read_file_def(cram_fd *fd); 516 int cram_write_file_def(cram_fd *fd, cram_file_def *def); 519 void cram_free_file_def(cram_file_def *def);
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H A D | cram_structs.h | 200 struct cram_file_def { struct 776 cram_file_def *file_def;
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/dports/biology/htslib/htslib-1.14/cram/ |
H A D | cram_io.h | 508 cram_file_def *cram_read_file_def(cram_fd *fd); 516 int cram_write_file_def(cram_fd *fd, cram_file_def *def); 519 void cram_free_file_def(cram_file_def *def);
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H A D | cram_structs.h | 200 struct cram_file_def { struct 776 cram_file_def *file_def;
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/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/ |
H A D | cram.h | 73 typedef struct cram_file_def cram_file_def; typedef
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/dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/ |
H A D | cram.h | 92 typedef struct cram_file_def cram_file_def; typedef
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/dports/biology/htslib/htslib-1.14/htslib/ |
H A D | cram.h | 92 typedef struct cram_file_def cram_file_def; typedef
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/dports/biology/vt/vt-0.57721/lib/htslib/cram/ |
H A D | cram_structs.h | 182 typedef struct cram_file_def { struct 187 } cram_file_def; argument 681 cram_file_def *file_def;
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H A D | cram_io.h | 775 cram_file_def *cram_read_file_def(cram_fd *fd); 783 int cram_write_file_def(cram_fd *fd, cram_file_def *def); 786 void cram_free_file_def(cram_file_def *def);
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H A D | cram_io.c | 3548 cram_file_def *cram_read_file_def(cram_fd *fd) { in cram_read_file_def() 3549 cram_file_def *def = malloc(sizeof(*def)); in cram_read_file_def() 3581 int cram_write_file_def(cram_fd *fd, cram_file_def *def) { in cram_write_file_def() 3585 void cram_free_file_def(cram_file_def *def) { in cram_free_file_def() 4091 cram_file_def *def = calloc(1, sizeof(*def)); in cram_dopen()
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/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/ |
H A D | cram_structs.h | 182 typedef struct cram_file_def { struct 187 } cram_file_def; argument 681 cram_file_def *file_def;
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H A D | cram_io.h | 775 cram_file_def *cram_read_file_def(cram_fd *fd); 783 int cram_write_file_def(cram_fd *fd, cram_file_def *def); 786 void cram_free_file_def(cram_file_def *def);
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/dports/biology/stacks/stacks-2.4/htslib/cram/ |
H A D | cram_structs.h | 182 typedef struct cram_file_def { struct 187 } cram_file_def; typedef 677 cram_file_def *file_def;
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H A D | cram_io.h | 767 cram_file_def *cram_read_file_def(cram_fd *fd); 775 int cram_write_file_def(cram_fd *fd, cram_file_def *def); 778 void cram_free_file_def(cram_file_def *def);
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/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/ |
H A D | cram_structs.h | 182 typedef struct cram_file_def { struct 187 } cram_file_def; argument 677 cram_file_def *file_def;
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H A D | cram_io.h | 767 cram_file_def *cram_read_file_def(cram_fd *fd); 775 int cram_write_file_def(cram_fd *fd, cram_file_def *def); 778 void cram_free_file_def(cram_file_def *def);
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/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/cram/ |
H A D | cram_io.h | 802 cram_file_def *cram_read_file_def(cram_fd *fd); 810 int cram_write_file_def(cram_fd *fd, cram_file_def *def); 813 void cram_free_file_def(cram_file_def *def);
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H A D | cram_structs.h | 183 struct cram_file_def { struct 688 cram_file_def *file_def;
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/dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/ |
H A D | cram_io.h | 731 cram_file_def *cram_read_file_def(cram_fd *fd); 739 int cram_write_file_def(cram_fd *fd, cram_file_def *def); 742 void cram_free_file_def(cram_file_def *def);
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H A D | cram_structs.h | 175 } cram_file_def; typedef 764 cram_file_def *file_def;
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H A D | cram_io.c | 4270 cram_file_def *cram_read_file_def(cram_fd *fd) { in cram_read_file_def() 4271 cram_file_def *def = malloc(sizeof(*def)); in cram_read_file_def() 4304 int cram_write_file_def(cram_fd *fd, cram_file_def *def) { in cram_write_file_def() 4308 void cram_free_file_def(cram_file_def *def) { in cram_free_file_def() 5002 cram_file_def def; in cram_open() 5231 cram_file_def def; in cram_openw_by_callbacks()
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