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Searched refs:ctrst (Results 1 – 6 of 6) sorted by relevance

/dports/biology/phyml/phyml-3.3.20200621/src/
H A Drw.c77 tree->ctrst->x[tree->n_root->num] = in RW_Independent_Contrasts()
78 (v2/(v2+v1))*tree->ctrst->x[n1->num] + in RW_Independent_Contrasts()
79 (v1/(v2+v1))*tree->ctrst->x[n2->num] ; in RW_Independent_Contrasts()
82 u = tree->ctrst->x[n1->num] - tree->ctrst->x[n2->num]; in RW_Independent_Contrasts()
118 v1 = fabs(tree->ctrst->tprime[n1->num]-tree->times->nd_t[d->num]); in RW_Independent_Contrasts_Post()
119 v2 = fabs(tree->ctrst->tprime[n2->num]-tree->times->nd_t[d->num]); in RW_Independent_Contrasts_Post()
122 tree->ctrst->x[d->num] = in RW_Independent_Contrasts_Post()
123 (v2/(v2+v1))*tree->ctrst->x[n1->num] + in RW_Independent_Contrasts_Post()
124 (v1/(v2+v1))*tree->ctrst->x[n2->num] ; in RW_Independent_Contrasts_Post()
127 u = tree->ctrst->x[n1->num] - tree->ctrst->x[n2->num]; in RW_Independent_Contrasts_Post()
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H A Dfree.h99 void Free_Contrasts(t_ctrst *ctrst);
H A Dfree.c1517 void Free_Contrasts(t_ctrst *ctrst) in Free_Contrasts() argument
1519 Free(ctrst->x); in Free_Contrasts()
1520 Free(ctrst->tprime); in Free_Contrasts()
1521 Free(ctrst); in Free_Contrasts()
H A Dmake.c1760 tree->ctrst = (t_ctrst *)mCalloc(1,sizeof(t_ctrst)); in Make_Contrasts()
1761 tree->ctrst->x = (phydbl *)mCalloc(2*tree->n_otu,sizeof(phydbl)); in Make_Contrasts()
1762 tree->ctrst->tprime = (phydbl *)mCalloc(2*tree->n_otu,sizeof(phydbl)); in Make_Contrasts()
H A Dinit.c3766 tree->ctrst->x[i] = tree->a_nodes[i]->ldsk->coord->lonlat[dim_idx]; in RW_Init_Contrasts()
3771 tree->ctrst->tprime[i] = tree->times->nd_t[i]; in RW_Init_Contrasts()
H A Dutilities.h740 …struct __Independent_Contrasts *ctrst; /*! Pointer to data structure used for independent co… member