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Searched refs:currstart (Results 1 – 6 of 6) sorted by relevance

/dports/biology/ncbi-toolkit/ncbi/demo/
H A Dsgd2asn.c332 Int4 curlen [6], bestlen [6], currstart [6], beststart [6], sublen [6]; member
362 odp->beststart [idx] = odp->currstart [idx]; in LookForOrfs()
370 odp->currstart [idx] = position - frame; in LookForOrfs()
380 odp->currstart [idx] = position - frame; in LookForOrfs()
386 odp->beststart [idx] = odp->currstart [idx]; in LookForOrfs()
416 od.currstart [i] = 0; in AnnotateBestOrf()
H A Dtbl2asn.c431 Int4 curlen [6], bestlen [6], currstart [6], beststart [6], sublen [6]; member
488 odp->beststart [idx] = odp->currstart [idx]; in LookForOrfs()
496 odp->currstart [idx] = position - frame; in LookForOrfs()
511 odp->currstart [idx] = position - frame; in LookForOrfs()
515 odp->currstart [idx] = position - frame - 3; in LookForOrfs()
518 odp->beststart [idx] = odp->currstart [idx]; in LookForOrfs()
525 odp->beststart [idx] = odp->currstart [idx]; in LookForOrfs()
560 od.currstart [i] = 0; in AnnotateBestOrf()
/dports/biology/mummer/mummer-4.0.0beta2-2-g277dac5/scripts/
H A Dmapview.pl535 $currstart=$g1[0];
539 if (($x1win <= $currstart) || ($x1win <= $currend)){
540 $currstart = $x1win;
545 if (($x2win <= $currstart) || ($x2win <= $currend) ){
/dports/science/gnudatalanguage/gdl-1.0.1/src/
H A Dprojections.cpp1724 Vertex currstart; in gdlProjForward() local
1737 minlon=maxlon=currstart.lon = (*lons)[k]; in gdlProjForward()
1738 minlat=maxlat=currstart.lat = (*lats)[k]; in gdlProjForward()
1739 currentVertexList.push_back(currstart); in gdlProjForward()
1752 … if (!((last.lon - currstart.lon == 0.0) && (last.lat - currstart.lat == 0.0))) {//close polygon. in gdlProjForward()
1754 curr.lon = currstart.lon; in gdlProjForward()
1755 curr.lat = currstart.lat; in gdlProjForward()
/dports/textproc/p5-CAM-PDF/CAM-PDF-1.60/lib/CAM/
H A DPDF.pm5087 my $currstart = 0;
5096 $self->{content} .= "$currstart $currnum\n$currblock";
5101 $currstart = $blockkeys[$i+1];
/dports/biology/ncbi-toolkit/ncbi/sequin/
H A Dsequin4.c7059 Int4 curlen [6], currstart [6], sublen [6]; member
7133 slp = SeqLocIntNew (odp->currstart [idx] + idx, in LookForOrfs()
7145 odp->currstart [idx] = position - frame; in LookForOrfs()
7160 odp->currstart [idx] = position - frame; in LookForOrfs()
7165 odp->currstart [idx] = position - frame - 3; in LookForOrfs()
7179 slp = SeqLocIntNew (MAX ((Int4) odp->currstart [idx] + idx - 3, (Int4) 0), in LookForOrfs()
7180 … MIN (odp->currstart [idx] + idx - 3 + (odp->curlen [idx]) * 3 + 2, odp->bioseq_len - 1), in LookForOrfs()
7222 od.currstart [i] = 0; in ListOrfs()
7234 od.currstart [i] = 0 - i; in ListOrfs()