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Searched refs:ec_num (Results 1 – 11 of 11) sorted by relevance

/dports/biology/ncbi-toolkit/ncbi/demo/
H A Dget_ec.pl86 $ec_num = $1;
89 $ec_num =~ s/\s+//g;
92 print OUT_AMB "$ec_num\t$ec_name\n";
93 $ec_num =~ s/-/n/g;
94 print OUT_AMB "$ec_num\t$ec_name\n";
/dports/devel/valgrind-lts/valgrind-dragonfly-dragonfly/coregrind/
H A Dm_transtab.c1215 EClassNo ec_num; in sanity_check_eclasses_in_sector() local
1261 ec_num = tteC->tte2ec_ec[k]; in sanity_check_eclasses_in_sector()
1262 if (ec_num < 0 || ec_num >= ECLASS_N) in sanity_check_eclasses_in_sector()
1264 if (ec_num != i) in sanity_check_eclasses_in_sector()
1300 ec_num = tteC->tte2ec_ec[j]; in sanity_check_eclasses_in_sector()
1301 if (ec_num < 0 || ec_num >= ECLASS_N) in sanity_check_eclasses_in_sector()
1306 if (sec->ec2tte[ec_num][ec_idx] != tteno) in sanity_check_eclasses_in_sector()
1980 EClassNo ec_num; in delete_tte() local
1996 ec_num = tteC->tte2ec_ec[i]; in delete_tte()
1998 vg_assert(ec_num >= 0 && ec_num < ECLASS_N); in delete_tte()
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/dports/devel/valgrind/valgrind-dragonfly-dragonfly/coregrind/
H A Dm_transtab.c1215 EClassNo ec_num; in sanity_check_eclasses_in_sector() local
1261 ec_num = tteC->tte2ec_ec[k]; in sanity_check_eclasses_in_sector()
1262 if (ec_num < 0 || ec_num >= ECLASS_N) in sanity_check_eclasses_in_sector()
1264 if (ec_num != i) in sanity_check_eclasses_in_sector()
1300 ec_num = tteC->tte2ec_ec[j]; in sanity_check_eclasses_in_sector()
1301 if (ec_num < 0 || ec_num >= ECLASS_N) in sanity_check_eclasses_in_sector()
1306 if (sec->ec2tte[ec_num][ec_idx] != tteno) in sanity_check_eclasses_in_sector()
1980 EClassNo ec_num; in delete_tte() local
1996 ec_num = tteC->tte2ec_ec[i]; in delete_tte()
1998 vg_assert(ec_num >= 0 && ec_num < ECLASS_N); in delete_tte()
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/dports/biology/py-biopython/biopython-1.79/Bio/KEGG/Enzyme/
H A D__init__.py275 ec_num, name = data.split(None, 1)
276 pathway = "PATH", ec_num, name
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/cleanup/
H A Dcleanup.cpp1703 string & ec_num = *ec_num_iter; in UpdateECNumbers() local
1704 size_t tlen = ec_num.length(); in UpdateECNumbers()
1705 CleanVisStringJunk(ec_num); in UpdateECNumbers()
1706 if (tlen != ec_num.length()) { in UpdateECNumbers()
1710 !CProt_ref::IsECNumberSplit(ec_num)) { in UpdateECNumbers()
1711 string new_val = CProt_ref::GetECNumberReplacement(ec_num); in UpdateECNumbers()
1713 ec_num = new_val; in UpdateECNumbers()
1728 string & ec_num = *ec_num_iter; in RemoveBadECNumbers() local
1729 size_t tlen = ec_num.length(); in RemoveBadECNumbers()
1730 CleanVisStringJunk(ec_num); in RemoveBadECNumbers()
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H A Dnewcleanupp.cpp5764 NStr::TruncateSpacesInPlace( ec_num ); in x_CleanupECNumber()
5767 s_RemoveInitial( ec_num, "EC ", NStr::eNocase ); in x_CleanupECNumber()
5775 string::reverse_iterator s1 = ec_num.rbegin(); in x_CleanupECNumber()
5791 ec_num = ec_num.substr(0, ec_num.length() - 1); in x_CleanupECNumber()
5792 s1 = ec_num.rbegin(); in x_CleanupECNumber()
5793 if (s1 == ec_num.rend()) { in x_CleanupECNumber()
5813 if( ec_num.empty() ) { in s_ECNumberCanBeSplit()
5824 string & ec_num = *ec_num_iter; in x_CleanupECNumberList() local
5825 x_CleanupECNumber( ec_num ); in x_CleanupECNumberList()
5826 if( s_ECNumberCanBeSplit(ec_num) ) { in x_CleanupECNumberList()
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H A Dnewcleanupp.hpp433 void x_CleanupECNumber( string &ec_num );
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/cleanup/
H A Dcleanup.cpp1703 string & ec_num = *ec_num_iter; in UpdateECNumbers() local
1704 size_t tlen = ec_num.length(); in UpdateECNumbers()
1705 CleanVisStringJunk(ec_num); in UpdateECNumbers()
1706 if (tlen != ec_num.length()) { in UpdateECNumbers()
1710 !CProt_ref::IsECNumberSplit(ec_num)) { in UpdateECNumbers()
1711 string new_val = CProt_ref::GetECNumberReplacement(ec_num); in UpdateECNumbers()
1713 ec_num = new_val; in UpdateECNumbers()
1728 string & ec_num = *ec_num_iter; in RemoveBadECNumbers() local
1729 size_t tlen = ec_num.length(); in RemoveBadECNumbers()
1730 CleanVisStringJunk(ec_num); in RemoveBadECNumbers()
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H A Dnewcleanupp.cpp5703 NStr::TruncateSpacesInPlace( ec_num ); in x_CleanupECNumber()
5706 s_RemoveInitial( ec_num, "EC ", NStr::eNocase ); in x_CleanupECNumber()
5714 string::reverse_iterator s1 = ec_num.rbegin(); in x_CleanupECNumber()
5730 ec_num = ec_num.substr(0, ec_num.length() - 1); in x_CleanupECNumber()
5731 s1 = ec_num.rbegin(); in x_CleanupECNumber()
5732 if (s1 == ec_num.rend()) { in x_CleanupECNumber()
5752 if( ec_num.empty() ) { in s_ECNumberCanBeSplit()
5763 string & ec_num = *ec_num_iter; in x_CleanupECNumberList() local
5764 x_CleanupECNumber( ec_num ); in x_CleanupECNumberList()
5765 if( s_ECNumberCanBeSplit(ec_num) ) { in x_CleanupECNumberList()
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H A Dnewcleanupp.hpp434 void x_CleanupECNumber( string &ec_num );
/dports/biology/p5-transdecoder/TransDecoder-TransDecoder-v5.4.0/PerlLib/
H A DGene_obj.pm164 ec_num => undef, #text (enzyme commission number)
2740 if ($gene_obj->{ec_num}) {
2741 push (@ec_numbers, $gene_obj->{ec_num});