Searched refs:ec_num (Results 1 – 11 of 11) sorted by relevance
/dports/biology/ncbi-toolkit/ncbi/demo/ |
H A D | get_ec.pl | 86 $ec_num = $1; 89 $ec_num =~ s/\s+//g; 92 print OUT_AMB "$ec_num\t$ec_name\n"; 93 $ec_num =~ s/-/n/g; 94 print OUT_AMB "$ec_num\t$ec_name\n";
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/dports/devel/valgrind-lts/valgrind-dragonfly-dragonfly/coregrind/ |
H A D | m_transtab.c | 1215 EClassNo ec_num; in sanity_check_eclasses_in_sector() local 1261 ec_num = tteC->tte2ec_ec[k]; in sanity_check_eclasses_in_sector() 1262 if (ec_num < 0 || ec_num >= ECLASS_N) in sanity_check_eclasses_in_sector() 1264 if (ec_num != i) in sanity_check_eclasses_in_sector() 1300 ec_num = tteC->tte2ec_ec[j]; in sanity_check_eclasses_in_sector() 1301 if (ec_num < 0 || ec_num >= ECLASS_N) in sanity_check_eclasses_in_sector() 1306 if (sec->ec2tte[ec_num][ec_idx] != tteno) in sanity_check_eclasses_in_sector() 1980 EClassNo ec_num; in delete_tte() local 1996 ec_num = tteC->tte2ec_ec[i]; in delete_tte() 1998 vg_assert(ec_num >= 0 && ec_num < ECLASS_N); in delete_tte() [all …]
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/dports/devel/valgrind/valgrind-dragonfly-dragonfly/coregrind/ |
H A D | m_transtab.c | 1215 EClassNo ec_num; in sanity_check_eclasses_in_sector() local 1261 ec_num = tteC->tte2ec_ec[k]; in sanity_check_eclasses_in_sector() 1262 if (ec_num < 0 || ec_num >= ECLASS_N) in sanity_check_eclasses_in_sector() 1264 if (ec_num != i) in sanity_check_eclasses_in_sector() 1300 ec_num = tteC->tte2ec_ec[j]; in sanity_check_eclasses_in_sector() 1301 if (ec_num < 0 || ec_num >= ECLASS_N) in sanity_check_eclasses_in_sector() 1306 if (sec->ec2tte[ec_num][ec_idx] != tteno) in sanity_check_eclasses_in_sector() 1980 EClassNo ec_num; in delete_tte() local 1996 ec_num = tteC->tte2ec_ec[i]; in delete_tte() 1998 vg_assert(ec_num >= 0 && ec_num < ECLASS_N); in delete_tte() [all …]
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/dports/biology/py-biopython/biopython-1.79/Bio/KEGG/Enzyme/ |
H A D | __init__.py | 275 ec_num, name = data.split(None, 1) 276 pathway = "PATH", ec_num, name
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/cleanup/ |
H A D | cleanup.cpp | 1703 string & ec_num = *ec_num_iter; in UpdateECNumbers() local 1704 size_t tlen = ec_num.length(); in UpdateECNumbers() 1705 CleanVisStringJunk(ec_num); in UpdateECNumbers() 1706 if (tlen != ec_num.length()) { in UpdateECNumbers() 1710 !CProt_ref::IsECNumberSplit(ec_num)) { in UpdateECNumbers() 1711 string new_val = CProt_ref::GetECNumberReplacement(ec_num); in UpdateECNumbers() 1713 ec_num = new_val; in UpdateECNumbers() 1728 string & ec_num = *ec_num_iter; in RemoveBadECNumbers() local 1729 size_t tlen = ec_num.length(); in RemoveBadECNumbers() 1730 CleanVisStringJunk(ec_num); in RemoveBadECNumbers() [all …]
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H A D | newcleanupp.cpp | 5764 NStr::TruncateSpacesInPlace( ec_num ); in x_CleanupECNumber() 5767 s_RemoveInitial( ec_num, "EC ", NStr::eNocase ); in x_CleanupECNumber() 5775 string::reverse_iterator s1 = ec_num.rbegin(); in x_CleanupECNumber() 5791 ec_num = ec_num.substr(0, ec_num.length() - 1); in x_CleanupECNumber() 5792 s1 = ec_num.rbegin(); in x_CleanupECNumber() 5793 if (s1 == ec_num.rend()) { in x_CleanupECNumber() 5813 if( ec_num.empty() ) { in s_ECNumberCanBeSplit() 5824 string & ec_num = *ec_num_iter; in x_CleanupECNumberList() local 5825 x_CleanupECNumber( ec_num ); in x_CleanupECNumberList() 5826 if( s_ECNumberCanBeSplit(ec_num) ) { in x_CleanupECNumberList() [all …]
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H A D | newcleanupp.hpp | 433 void x_CleanupECNumber( string &ec_num );
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/cleanup/ |
H A D | cleanup.cpp | 1703 string & ec_num = *ec_num_iter; in UpdateECNumbers() local 1704 size_t tlen = ec_num.length(); in UpdateECNumbers() 1705 CleanVisStringJunk(ec_num); in UpdateECNumbers() 1706 if (tlen != ec_num.length()) { in UpdateECNumbers() 1710 !CProt_ref::IsECNumberSplit(ec_num)) { in UpdateECNumbers() 1711 string new_val = CProt_ref::GetECNumberReplacement(ec_num); in UpdateECNumbers() 1713 ec_num = new_val; in UpdateECNumbers() 1728 string & ec_num = *ec_num_iter; in RemoveBadECNumbers() local 1729 size_t tlen = ec_num.length(); in RemoveBadECNumbers() 1730 CleanVisStringJunk(ec_num); in RemoveBadECNumbers() [all …]
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H A D | newcleanupp.cpp | 5703 NStr::TruncateSpacesInPlace( ec_num ); in x_CleanupECNumber() 5706 s_RemoveInitial( ec_num, "EC ", NStr::eNocase ); in x_CleanupECNumber() 5714 string::reverse_iterator s1 = ec_num.rbegin(); in x_CleanupECNumber() 5730 ec_num = ec_num.substr(0, ec_num.length() - 1); in x_CleanupECNumber() 5731 s1 = ec_num.rbegin(); in x_CleanupECNumber() 5732 if (s1 == ec_num.rend()) { in x_CleanupECNumber() 5752 if( ec_num.empty() ) { in s_ECNumberCanBeSplit() 5763 string & ec_num = *ec_num_iter; in x_CleanupECNumberList() local 5764 x_CleanupECNumber( ec_num ); in x_CleanupECNumberList() 5765 if( s_ECNumberCanBeSplit(ec_num) ) { in x_CleanupECNumberList() [all …]
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H A D | newcleanupp.hpp | 434 void x_CleanupECNumber( string &ec_num );
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/dports/biology/p5-transdecoder/TransDecoder-TransDecoder-v5.4.0/PerlLib/ |
H A D | Gene_obj.pm | 164 ec_num => undef, #text (enzyme commission number) 2740 if ($gene_obj->{ec_num}) { 2741 push (@ec_numbers, $gene_obj->{ec_num});
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