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Searched refs:effsample (Results 1 – 3 of 3) sorted by relevance

/dports/biology/migrate/migrate-3.6.11/src/
H A Dreporter.h48 …EAL single_chain_var(world_fmt *world, long T, MYREAL *variance, MYREAL *autoc, MYREAL *effsample);
51 MYREAL *autocorr, MYREAL *effsample);
52 …_frombayes(world_fmt *world, long T, MYREAL *params, long locus, MYREAL *autoc, MYREAL *effsample);
H A Dreporter.c386 MYREAL *autocorr, MYREAL *effsample) in print_bayes_ess() argument
422 offset, offset, " ", "Theta",pa0+1,autocorr[pa],effsample[pa]); in print_bayes_ess()
423 if(effsample[pa]<ESSMINIMUM && file==world->outfile) in print_bayes_ess()
429 "Theta",pa0+1, pa+1, custm2[pa0],autocorr[pa],effsample[pa]); in print_bayes_ess()
430 if(effsample[pa]<ESSMINIMUM && file==world->outfile) in print_bayes_ess()
440 if(effsample[pa]<ESSMINIMUM && file==world->outfile) in print_bayes_ess()
449 if(effsample[pa]<ESSMINIMUM && file==world->outfile) in print_bayes_ess()
461 if(effsample[pa]<ESSMINIMUM && file==world->outfile) in print_bayes_ess()
470 if(effsample[pa]<ESSMINIMUM && file==world->outfile) in print_bayes_ess()
690 effsample[j] = (MYREAL) (n * (1. - autoc[j])/(1. + autoc[j])); in single_chain_var()
[all …]
H A Dbayes.c2624 MYREAL * effsample = world->effective_sample; in bayes_progress() local
2687 paramstr, accrat,param0,world->bayes->delta[j], autocorr[j],effsample[j]); in bayes_progress()
2692 paramstr, accrat,param0, autocorr[j],effsample[j]); in bayes_progress()
2699 …yes->accept[j]/bayes->trials[j],world->likelihood[world->numlike-1], autocorr[j0],effsample[j0]); in bayes_progress()
2704 …bayes->accept[j]/bayes->trials[j],world->likelihood[world->numlike-1], autocorr[j0],effsample[j0]); in bayes_progress()