Searched refs:ensSliceGetEnd (Results 1 – 10 of 10) sorted by relevance
/dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/ |
H A D | ensbaseadaptor.c | 1882 (ensSliceGetStart(slice) > ensSliceGetEnd(slice)) in ensBaseadaptorRetrieveFeature() 1904 if ((ensSliceGetStart(slice) > ensSliceGetEnd(slice)) in ensBaseadaptorRetrieveFeature() 1927 if (ensSliceGetStart(slice) > ensSliceGetEnd(slice)) in ensBaseadaptorRetrieveFeature() 1930 slstart = ensSliceGetEnd(slice) - slend + 1; in ensBaseadaptorRetrieveFeature() 1931 slend = ensSliceGetEnd(slice) + sllength - tmpstart + 1; in ensBaseadaptorRetrieveFeature() 1942 slstart = ensSliceGetEnd(slice) - slend + 1; in ensBaseadaptorRetrieveFeature() 1948 slstart = ensSliceGetEnd(slice) - slend - sllength + 1; in ensBaseadaptorRetrieveFeature() 1957 slend = ensSliceGetEnd(slice) - slstart + 1; in ensBaseadaptorRetrieveFeature() 1958 slstart = ensSliceGetEnd(slice) - slend + 1; in ensBaseadaptorRetrieveFeature()
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H A D | ensfeature.c | 1555 (ensSliceGetEnd(aslice) < alength)) in ensFeatureFetchAllAlternativelocations() 1568 ensSliceGetEnd(aslice) + 1, in ensFeatureFetchAllAlternativelocations() 2155 nf->Start = ensSliceGetEnd(slice) - nfend + 1; in ensFeatureTransfer() 2156 nf->End = ensSliceGetEnd(slice) - nfstart + 1; in ensFeatureTransfer() 2370 nfeature->End = ensSliceGetEnd(pslice); in ensFeatureTransform() 4552 (start > ensSliceGetEnd(slice)) || in featureadaptorRemap() 4563 ensSliceGetEnd(slice), in featureadaptorRemap() 4826 table, ensSliceGetEnd(slice), in featureadaptorSliceFetch() 4837 table, ensSliceGetEnd(slice), in featureadaptorSliceFetch() 4868 table, ensSliceGetEnd(slice), in featureadaptorSliceFetch() [all …]
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H A D | enssequence.c | 1041 srstart = ensSliceGetEnd(slice) - end + 1; in ensSequenceadaptorFetchSliceSubSeq() 1043 srend = ensSliceGetEnd(slice) - start + 1; in ensSequenceadaptorFetchSliceSubSeq() 1205 if (ensSliceGetStart(slice) > ensSliceGetEnd(slice)) in ensSequenceadaptorFetchSliceSubStr() 1210 ensSliceGetEnd(slice), in ensSequenceadaptorFetchSliceSubStr()
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H A D | ensslice.h | 137 ajint ensSliceGetEnd(const EnsPSlice slice);
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H A D | ensassemblymapper.c | 3544 ensSliceGetEnd(slice), in ensAssemblymapperMapSlice() 3660 ensSliceGetEnd(slice), in ensAssemblymapperMapToSlice()
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H A D | ensgvvariation.c | 9312 ensSliceGetEnd(slice), in ensGvvariationfeatureadaptorFetchAllbyFrequency() 9427 ensSliceGetEnd(slice)); in ensGvvariationfeatureadaptorFetchAllbyGvpopulation() 9666 ensSliceGetEnd(slice)); in ensGvvariationfeatureadaptorFetchAllbySliceAnnotated()
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H A D | ensexon.c | 3021 if (ensSliceGetStart(slice) > ensSliceGetEnd(slice)) in ensExonFetchSequenceSliceStr()
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H A D | ensgene.c | 5257 if ((start >= ensSliceGetStart(slice)) && (end <= ensSliceGetEnd(slice))) in ensGeneadaptorFetchAllbySlice()
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H A D | ensslice.c | 626 ajint ensSliceGetEnd(const EnsPSlice slice) in ensSliceGetEnd() function
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H A D | enstranscript.c | 9137 if ((start >= ensSliceGetStart(slice)) && (end <= ensSliceGetEnd(slice))) in ensTranscriptadaptorFetchAllbySlice()
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