Searched refs:exons_with_gaps (Results 1 – 2 of 2) sorted by relevance
1180 void CGeneModel::TrimEdgesToFrameInOtherAlignGaps(const TExons& exons_with_gaps) in TrimEdgesToFrameInOtherAlignGaps() argument1189 for (int i = 0; i<int(exons_with_gaps.size())-1; ++i) { in TrimEdgesToFrameInOtherAlignGaps()1190 if (exons_with_gaps[i].GetTo() < left_edge && left_edge < exons_with_gaps[i+1].GetFrom()) { in TrimEdgesToFrameInOtherAlignGaps()1191 _ASSERT( !exons_with_gaps[i].m_ssplice && !exons_with_gaps[i+1].m_fsplice ); in TrimEdgesToFrameInOtherAlignGaps()1192 _ASSERT( right_edge >= exons_with_gaps[i+1].GetFrom() ); in TrimEdgesToFrameInOtherAlignGaps()1193 …qRange tlim = mrnamap.MapRangeOrigToEdited(TSignedSeqRange(left_edge,exons_with_gaps[i+1].GetFrom(… in TrimEdgesToFrameInOtherAlignGaps()1206 … if (exons_with_gaps[i].GetTo() < right_edge && right_edge < exons_with_gaps[i+1].GetFrom()) { in TrimEdgesToFrameInOtherAlignGaps()1207 _ASSERT( !exons_with_gaps[i].m_ssplice && !exons_with_gaps[i+1].m_fsplice ); in TrimEdgesToFrameInOtherAlignGaps()1208 _ASSERT( left_edge <= exons_with_gaps[i].GetTo() ); in TrimEdgesToFrameInOtherAlignGaps()1209 …TSignedSeqRange tlim = mrnamap.MapRangeOrigToEdited(TSignedSeqRange(exons_with_gaps[i].GetTo(),rig… in TrimEdgesToFrameInOtherAlignGaps()
585 void TrimEdgesToFrameInOtherAlignGaps(const TExons& exons_with_gaps);