Searched refs:extra_returns (Results 1 – 10 of 10) sorted by relevance
/dports/biology/ncbi-toolkit/ncbi/algo/blast/api/ |
H A D | blast_api.c | 201 ASSERT(seq_src && options && extra_returns); in s_RPSExtraStructsSetUp() 324 Blast_SummaryReturn* extra_returns) in s_BlastThreadManager() argument 345 hsp_stream && extra_returns); in s_BlastThreadManager() 587 Blast_SummaryReturn* extra_returns) in Blast_RunSearch() argument 652 extra_returns))) in Blast_RunSearch() 684 extra_returns->error = in Blast_RunSearch() 825 if (extra_returns->error) in Blast_DatabaseSearch() 831 filter_out, extra_returns); in Blast_DatabaseSearch() 942 if (extra_returns->error) in PHIBlastRunSearch() 951 filter_out, extra_returns); in PHIBlastRunSearch() [all …]
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H A D | blast_api.h | 88 Blast_SummaryReturn* extra_returns); 109 Blast_SummaryReturn* extra_returns); 133 Blast_SummaryReturn* extra_returns); 153 SeqLoc** filter_out, Blast_SummaryReturn* extra_returns);
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H A D | twoseq_api.c | 325 Blast_SummaryReturn* extra_returns, in Blast_SearchOptionsFromSummaryOptions() argument 352 status = SBlastOptionsNew(kProgram, search_options, extra_returns); in Blast_SearchOptionsFromSummaryOptions() 378 Blast_SummaryReturn* extra_returns; in BLAST_TwoSeqLocSets() local 383 extra_returns = Blast_SummaryReturnNew(); in BLAST_TwoSeqLocSets() 387 extra_returns, &options, in BLAST_TwoSeqLocSets() 395 extra_returns); in BLAST_TwoSeqLocSets() 404 *extra_returns_ptr = extra_returns; in BLAST_TwoSeqLocSets() 406 Blast_SummaryReturnFree(extra_returns); in BLAST_TwoSeqLocSets()
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H A D | twoseq_api.h | 193 Blast_SummaryReturn* extra_returns, 217 Blast_SummaryReturn* *extra_returns);
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H A D | blast_options_api.c | 46 Blast_SummaryReturn* extra_returns) in SBlastOptionsNew() argument 61 if (!options_out || !extra_returns) in SBlastOptionsNew() 72 SBlastMessageWrite(&extra_returns->error, SEV_ERROR, message, NULL, FALSE); in SBlastOptionsNew() 83 …SBlastMessageWrite(&extra_returns->error, SEV_ERROR, "Failed to initialize default options\n", NUL… in SBlastOptionsNew()
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H A D | blast_options_api.h | 80 Blast_SummaryReturn* extra_returns);
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H A D | blast_format.c | 521 Blast_SummaryReturn* extra_returns = Blast_SummaryReturnNew(); in BlastFormattingInfoNewBasic() local 526 extra_returns, advanced_options, in BlastFormattingInfoNewBasic() 529 Blast_SummaryReturnFree(extra_returns); in BlastFormattingInfoNewBasic()
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/dports/biology/ncbi-toolkit/ncbi/demo/ |
H A D | bl2seq.c | 793 Blast_SummaryReturn* extra_returns = Blast_SummaryReturnNew(); in Main_new() local 878 &repeat_mask, &extra_returns->error)) != 0) in Main_new() 880 if (extra_returns && extra_returns->error) in Main_new() 882 ErrSev max_sev = SBlastMessageErrPost(extra_returns->error); in Main_new() 894 &extra_returns); in Main_new() 901 SBlastMessageErrPost(extra_returns->error); in Main_new() 937 extra_returns); in Main_new() 939 status = Blast_PrintOutputFooter(format_info, extra_returns); in Main_new() 945 extra_returns = Blast_SummaryReturnFree(extra_returns); in Main_new()
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/dports/math/py-statsmodels/statsmodels-0.13.1/statsmodels/tools/ |
H A D | numdiff.py | 349 extra_returns="""grad : nparray 387 extra_returns="""grad : ndarray 431 extra_returns="",
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/dports/biology/ncbi-toolkit/ncbi/sequin/ |
H A D | sequin7.c | 7046 Blast_SummaryReturn *extra_returns; in RNABlastOptionNew() local 7051 extra_returns); in RNABlastOptionNew() 7098 extra_returns = Blast_SummaryReturnFree(extra_returns); in RNABlastOptionNew() 7117 Blast_SummaryReturn *extra_returns; in RNAScreenSequence() local 7133 extra_returns = Blast_SummaryReturnNew(); in RNAScreenSequence() 7136 extra_returns = Blast_SummaryReturnFree(extra_returns); in RNAScreenSequence() 16792 Blast_SummaryReturn *extra_returns; in BarcodeBlastOptionNew() local 16797 extra_returns); in BarcodeBlastOptionNew() 16844 extra_returns = Blast_SummaryReturnFree(extra_returns); in BarcodeBlastOptionNew() 16856 Blast_SummaryReturn *extra_returns; in DoesOneBioseqMatchBarcodeDatabase() local [all …]
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