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Searched refs:file_bfile (Results 1 – 18 of 18) sorted by relevance

/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dldr.cpp53 file_bfile = cPar.file_bfile; in CopyFromParam()
H A Dparam.cpp170 if (!file_bfile.empty()) { in ReadFiles()
249 if (!file_bfile.empty()) { in ReadFiles()
696 if (!file_bfile.empty()) { in CheckParam()
697 str = file_bfile + ".bim"; in CheckParam()
702 str = file_bfile + ".bed"; in CheckParam()
707 str = file_bfile + ".fam"; in CheckParam()
814 if (!file_bfile.empty()) { in CheckParam()
1262 if (!file_bfile.empty()) { in ReadGenotypes()
1282 if (!file_bfile.empty()) { in ReadGenotypes()
1303 if (!file_bfile.empty()) { in CalcKin()
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H A Dvarcov.cpp51 file_bfile = cPar.file_bfile; in CopyFromParam()
350 string file_bed = file_bfile + ".bed"; in AnalyzePlink()
H A Dldr.h37 string file_bfile; variable
H A Dvarcov.h36 string file_bfile; variable
H A Dprdt.h38 string file_bfile; variable
H A Dlm.h36 string file_bfile; variable
H A Dprdt.cpp46 file_bfile = cPar.file_bfile; in CopyFromParam()
312 string file_bed = file_bfile + ".bed"; in AnalyzePlink()
H A Dmvlmm.h36 string file_bfile; variable
H A Dbslmmdap.h37 string file_bfile; variable
H A Dlm.cpp53 file_bfile = cPar.file_bfile; in CopyFromParam()
499 string file_bed = file_bfile + ".bed"; in AnalyzePlink()
H A Dlmm.h56 string file_bfile; variable
H A Dgemma.cpp765 cPar.file_bfile = str; in Assign()
1701 if (!cPar.file_bfile.empty()) { in BatchRun()
1932 if (!cPar.file_bfile.empty()) { in BatchRun()
2047 if (!cPar.file_bfile.empty()) { in BatchRun()
2478 if (!cPar.file_bfile.empty()) { in BatchRun()
2479 file_str = cPar.file_bfile + ".bed"; in BatchRun()
2499 if (!cPar.file_bfile.empty()) { in BatchRun()
2518 if (!cPar.file_bfile.empty()) { in BatchRun()
2519 file_str = cPar.file_bfile + ".bed"; in BatchRun()
2789 if (!cPar.file_bfile.empty()) { in BatchRun()
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H A Dbslmm.h38 string file_bfile; variable
H A Dparam.h133 string file_bfile, file_mbfile; variable
H A Dlmm.cpp57 file_bfile = cPar.file_bfile; in CopyFromParam()
1702 string file_bed = file_bfile + ".bed"; in AnalyzePlink()
2381 string file_bed = file_bfile + ".bed"; in AnalyzePlinkGXE()
H A Dbslmm.cpp54 file_bfile = cPar.file_bfile; in CopyFromParam()
H A Dmvlmm.cpp55 file_bfile = cPar.file_bfile; in CopyFromParam()
3412 string file_bed = file_bfile + ".bed"; in AnalyzePlink()
4405 string file_bed = file_bfile + ".bed"; in AnalyzePlinkGXE()