Searched refs:file_pheno (Results 1 – 5 of 5) sorted by relevance
/dports/biology/gemma/GEMMA-0.98.3/src/ |
H A D | param.cpp | 183 if (ReadFile_pheno(file_pheno, indicator_pheno, pheno, p_column) == in ReadFiles() 258 if (!file_pheno.empty()) { in ReadFiles() 261 if (ReadFile_pheno(file_pheno, indicator_pheno, pheno, p_column) == in ReadFiles() 302 if (ReadFile_pheno(file_pheno, indicator_pheno, pheno, p_column) == false) { in ReadFiles() 345 if (!file_pheno.empty()) { in ReadFiles() 348 if (ReadFile_pheno(file_pheno, indicator_pheno, pheno, p_column) == in ReadFiles() 486 if (file_geno.empty() && file_gene.empty() && !file_pheno.empty()) { in ReadFiles() 715 str = file_pheno; in CheckParam() 854 if (file_pheno.empty() && (a_mode == 43 || a_mode == 5)) { in CheckParam() 866 } else if (!file_pheno.empty()) { in CheckParam() [all …]
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H A D | gemma_io.h | 55 bool ReadFile_pheno(const string &file_pheno, 59 bool ReadFile_column(const string &file_pheno, vector<int> &indicator_idv,
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H A D | param.h | 135 string file_pheno; variable
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H A D | gemma_io.cpp | 340 bool ReadFile_column(const string &file_pheno, vector<int> &indicator_idv, in ReadFile_column() argument 346 igzstream infile(file_pheno.c_str(), igzstream::in); in ReadFile_column() 348 cout << "error! fail to open phenotype file: " << file_pheno << endl; in ReadFile_column() 357 auto infilen = file_pheno.c_str(); in ReadFile_column() 382 bool ReadFile_pheno(const string &file_pheno, in ReadFile_pheno() argument 390 igzstream infile(file_pheno.c_str(), igzstream::in); in ReadFile_pheno() 392 cout << "error! fail to open phenotype file: " << file_pheno << endl; in ReadFile_pheno()
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H A D | gemma.cpp | 801 cPar.file_pheno = str; in Assign()
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