Searched refs:file_snps (Results 1 – 5 of 5) sorted by relevance
41 bool ReadFile_snps(const string file_snps, set<string> &setSnps);42 bool ReadFile_snps_header(const string &file_snps, set<string> &setSnps);
158 string file_snps; // File containing analyzed SNPs or genes. variable
152 bool ReadFile_snps(const string file_snps, set<string> &setSnps) { in ReadFile_snps() argument156 igzstream infile(file_snps.c_str(), igzstream::in); in ReadFile_snps()158 cout << "error! fail to open snps file: " << file_snps << endl; in ReadFile_snps()180 bool ReadFile_snps_header(const string &file_snps, set<string> &setSnps) { in ReadFile_snps_header() argument184 igzstream infile(file_snps.c_str(), igzstream::in); in ReadFile_snps_header()186 cout << "error! fail to open snps file: " << file_snps << endl; in ReadFile_snps_header()
148 if (!file_snps.empty()) { in ReadFiles()149 if (ReadFile_snps(file_snps, setSnps) == false) { in ReadFiles()916 enforce_fexists(file_snps, "open file"); in CheckParam()
1040 cPar.file_snps = str; in Assign()