| /dports/biology/seqan/seqan-library-2.4.0/include/seqan/blast/ |
| H A D | blast_tabular_in.h | 155 atEnd(BlastTabularFileIn<TContext> & formattedFile) in atEnd() argument
157 return atEnd(context(formattedFile), formattedFile.iter, BlastTabular()); in atEnd()
222 onRecord(BlastTabularFileIn<TContext> & formattedFile) in onRecord() argument
224 return onRecord(context(formattedFile), BlastTabular()); in onRecord()
896 BlastTabularFileIn<TContext> & formattedFile) in readRecord() argument
898 readRecord(blastRecord, formattedFile.iter, context(formattedFile), BlastTabular()); in readRecord()
939 readHeader(BlastTabularFileIn<TContext> & formattedFile) in readHeader() argument
941 readHeader(context(formattedFile), formattedFile.iter, BlastTabular()); in readHeader()
1003 readFooter(BlastTabularFileIn<TContext> & formattedFile) in readFooter() argument
1005 readFooter(context(formattedFile), formattedFile.iter, BlastTabular()); in readFooter()
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| H A D | blast_tabular_out.h | 661 writeRecord(BlastTabularFileOut<TContext> & formattedFile, in writeRecord() argument
664 writeRecord(formattedFile.iter, context(formattedFile), r, BlastTabular()); in writeRecord()
698 writeHeader(BlastTabularFileOut<TContext> & formattedFile) in writeHeader() argument
700 writeHeader(formattedFile.iter, context(formattedFile), BlastTabular()); in writeHeader()
740 writeFooter(BlastTabularFileOut<TContext> & formattedFile) in writeFooter() argument
742 writeFooter(formattedFile.iter, context(formattedFile), BlastTabular()); in writeFooter()
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| H A D | blast_report_out.h | 733 writeRecord(BlastReportFileOut<TContext> & formattedFile,
736 writeRecord(formattedFile.iter, context(formattedFile), r, BlastReport());
788 writeHeader(BlastReportFileOut<TContext> & formattedFile)
790 writeHeader(formattedFile.iter, context(formattedFile), BlastReport());
858 writeFooter(BlastReportFileOut<TContext> & formattedFile)
860 writeFooter(formattedFile.iter, context(formattedFile), BlastReport());
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/blast/ |
| H A D | blast_tabular_in.h | 155 atEnd(BlastTabularFileIn<TContext> & formattedFile) in atEnd() argument
157 return atEnd(context(formattedFile), formattedFile.iter, BlastTabular()); in atEnd()
222 onRecord(BlastTabularFileIn<TContext> & formattedFile) in onRecord() argument
224 return onRecord(context(formattedFile), BlastTabular()); in onRecord()
896 BlastTabularFileIn<TContext> & formattedFile) in readRecord() argument
898 readRecord(blastRecord, formattedFile.iter, context(formattedFile), BlastTabular()); in readRecord()
939 readHeader(BlastTabularFileIn<TContext> & formattedFile) in readHeader() argument
941 readHeader(context(formattedFile), formattedFile.iter, BlastTabular()); in readHeader()
1003 readFooter(BlastTabularFileIn<TContext> & formattedFile) in readFooter() argument
1005 readFooter(context(formattedFile), formattedFile.iter, BlastTabular()); in readFooter()
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| H A D | blast_tabular_out.h | 661 writeRecord(BlastTabularFileOut<TContext> & formattedFile, in writeRecord() argument
664 writeRecord(formattedFile.iter, context(formattedFile), r, BlastTabular()); in writeRecord()
698 writeHeader(BlastTabularFileOut<TContext> & formattedFile) in writeHeader() argument
700 writeHeader(formattedFile.iter, context(formattedFile), BlastTabular()); in writeHeader()
740 writeFooter(BlastTabularFileOut<TContext> & formattedFile) in writeFooter() argument
742 writeFooter(formattedFile.iter, context(formattedFile), BlastTabular()); in writeFooter()
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| H A D | blast_report_out.h | 733 writeRecord(BlastReportFileOut<TContext> & formattedFile,
736 writeRecord(formattedFile.iter, context(formattedFile), r, BlastReport());
788 writeHeader(BlastReportFileOut<TContext> & formattedFile)
790 writeHeader(formattedFile.iter, context(formattedFile), BlastReport());
858 writeFooter(BlastReportFileOut<TContext> & formattedFile)
860 writeFooter(formattedFile.iter, context(formattedFile), BlastReport());
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