/dports/sysutils/istio/istio-1.6.7/mixer/adapter/stackdriver/contextgraph/ |
H A D | workload_test.go | 137 var fullName string 140 if fullName != "" { 184 {policyWorkloadInstanceEntity.fullName, svcEntity.fullName, httpComm}, 185 {policyOwnerEntity.fullName, svcEntity.fullName, httpComm}, 186 {policyWorkloadEntity.fullName, svcEntity.fullName, httpComm}, 208 {svcEntity.fullName, telemetryWorkloadInstanceEntity.fullName, httpComm}, 212 {policyOwnerEntity.fullName, telemetryOwnerEntity.fullName, httpComm}, 213 {policyWorkloadEntity.fullName, telemetryOwnerEntity.fullName, httpComm}, 216 {svcEntity.fullName, telemetryOwnerEntity.fullName, httpComm}, 220 {policyOwnerEntity.fullName, telemetryWorkloadEntity.fullName, httpComm}, [all …]
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/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/sv/ |
H A D | StructuralVariationDiscoveryArgumentCollection.java | 30 @Argument(doc = "Kmer size.", fullName = "k-size") 37 fullName = "min-evidence-mapq") 42 fullName = "min-evidence-match-length") 61 fullName = "high-depth-coverage-factor") 66 fullName = "min-evidence-coverage-ratio") 79 fullName = "cleaner-max-intervals") 84 fullName = "cleaner-min-kmer-count") 89 fullName = "cleaner-max-copy-number") 122 fullName = "sv-evidence-filter-type") 207 fullName = "kmers-to-ignore") [all …]
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/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/help/ |
H A D | TestWDLTool.java | 65 @Argument(fullName = "requiredListFileInputNoCompanions", 242 @Argument(fullName = "optionalScalarStringInput", 248 @Argument(fullName = "optionalListStringInput", 260 @Argument(fullName = "optionalScalarIntegerInput", 266 @Argument(fullName = "optionalListIntegerInput", 278 @Argument(fullName = "optionalScalarLongInput", 284 @Argument(fullName = "optionalListLongInput", 296 @Argument(fullName = "optionalScalarFloatInput", 302 @Argument(fullName = "optionalListFloatInput", 314 @Argument(fullName = "optionalScalarDoubleInput", [all …]
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/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/ |
H A D | ReadThreadingAssemblerArgumentCollection.java | 39 …@Argument(fullName= KMER_SIZE_LONG_NAME, doc="Kmer size to use in the read threading assembler", o… 55 …@Argument(fullName="allow-non-unique-kmers-in-ref", doc="Allow graphs that have non-unique kmers i… 62 …@Argument(fullName="num-pruning-samples", doc="Number of samples that must pass the minPruning thr… 71 …@Argument(fullName="min-dangling-branch-length", doc="Minimum length of a dangling branch to attem… 79 …@Argument(fullName="recover-all-dangling-branches", doc="Recover all dangling branches", optional … 104 …@Argument(fullName="min-pruning", doc = "Minimum support to not prune paths in the graph", optiona… 112 …@Argument(fullName="adaptive-pruning-initial-error-rate", doc = "Initial base error rate estimate … 119 …@Argument(fullName="pruning-lod-threshold", doc = "Ln likelihood ratio threshold for adaptive prun… 133 …@Argument(fullName="max-unpruned-variants", doc = "Maximum number of variants in graph the adaptiv… 175 …@Argument(fullName="graph-output", shortName="graph", doc="Write debug assembly graph information … [all …]
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H A D | HaplotypeCallerArgumentCollection.java | 69 …@Argument(fullName = StandardArgumentDefinitions.COMPARISON_LONG_NAME, shortName = StandardArgumen… 86 …@Argument(fullName = GQ_BAND_LONG_NAME, shortName = GQ_BAND_SHORT_NAME, doc= "Exclusive upper boun… 111 …@Argument(fullName = "indel-size-to-eliminate-in-ref-model", doc = "The size of an indel to check … 121 …@Argument(fullName = "disable-optimizations", doc="Don't skip calculations in ActiveRegions with n… 161 …@Argument(fullName = "keep-rg", doc = "Only use reads from this read group when making calls (but … 168 …@Argument(fullName = "just-determine-active-regions", doc = "Just determine ActiveRegions, don't p… 174 …@Argument(fullName="debug-assembly-region-state", doc="Write output files for assembled regions wi… 186 …@Argument(fullName = "dont-genotype", doc = "Perform assembly but do not genotype variants", optio… 193 …@Argument(fullName = DO_NOT_RUN_PHYSICAL_PHASING_LONG_NAME, doc = "Disable physical phasing", opt… 200 …@Argument(fullName = DO_NOT_CORRECT_OVERLAPPING_BASE_QUALITIES_LONG_NAME, doc = "Disable overlappi… [all …]
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/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/walkers/mutect/filtering/ |
H A D | M2FiltersArgumentCollection.java | 27 …@Argument(fullName = THRESHOLD_STRATEGY_LONG_NAME, optional = true, doc = "The method for optimizi… 43 …@Argument(fullName = M2ArgumentCollection.MITOCHONDRIA_MODE_LONG_NAME, optional = true, doc = "Set… 76 …@Argument(fullName = MAX_ALT_ALLELE_COUNT_LONG_NAME, optional = true, doc = "Maximum alt alleles p… 82 …@Argument(fullName = MIN_MEDIAN_MAPPING_QUALITY_LONG_NAME, optional = true, doc="Minimum median ma… 85 …@Argument(fullName = MIN_MEDIAN_BASE_QUALITY_LONG_NAME, optional = true, doc="Minimum median base … 100 @Argument(fullName = MIN_AF_LONG_NAME, doc="Minimum allele fraction required", optional = true) 115 …@Argument(fullName = CONTAMINATION_TABLE_LONG_NAME, optional = true, doc = "Tables containing cont… 118 …@Argument(fullName = CONTAMINATION_ESTIMATE_LONG_NAME, optional = true, doc = "Estimate of contami… 153 …@Argument(fullName= LOG_SNV_PRIOR_LONG_NAME, doc="Initial ln prior probability that a site has a s… 160 …@Argument(fullName= LOG_INDEL_PRIOR_LONG_NAME, doc="Initial ln prior probability that a site has a… [all …]
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/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/walkers/vqsr/ |
H A D | VariantRecalibratorArgumentCollection.java | 22 …@Argument(fullName = "mode", shortName = "mode", doc = "Recalibration mode to employ", optional = … 29 @Argument(fullName="use-allele-specific-annotations", 39 …@Argument(fullName = "max-gaussians", doc = "Max number of Gaussians for the positive model", opti… 49 …@Argument(fullName = "max-negative-gaussians", doc = "Max number of Gaussians for the negative mod… 57 … @Argument(fullName = "max-iterations", doc = "Maximum number of VBEM iterations", optional = true) 65 … @Argument(fullName = "k-means-iterations", doc = "Number of k-means iterations", optional = true) 77 …@Argument(fullName = "shrinkage", doc = "The shrinkage parameter in the variational Bayes algorith… 81 …@Argument(fullName = "dirichlet",doc = "The dirichlet parameter in the variational Bayes algorithm… 85 …@Argument(fullName = "prior-counts", doc = "The number of prior counts to use in the variational B… 92 …@Argument(fullName = "maximum-training-variants", doc = "Maximum number of training data", optiona… [all …]
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/dports/devel/efl/efl-1.25.1/doc/docfx/default_efl/partials/ |
H A D | title.tmpl.partial | 3 Namespace {{fullName.0.value}} 6 Class {{fullName.0.value}} 9 Struct {{fullName.0.value}} 12 Interface {{fullName.0.value}} 15 Enum {{fullName.0.value}} 18 Delegate {{fullName.0.value}} 24 Field {{fullName.0.value}} 27 Property {{fullName.0.value}} 30 Method {{fullName.0.value}} 33 Event {{fullName.0.value}} [all …]
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/dports/lang/v8/v8-9.6.180.12/third_party/icu/patches/ |
H A D | locid_operators.patch | 7 if (fullName != fullNameBuffer) uprv_free(fullName); 9 - if (other.fullName == other.fullNameBuffer) { 13 + if (other.fullName == other.fullNameBuffer) { 14 fullName = fullNameBuffer; 16 fullName = other.fullName; 19 - if (other.baseName == other.fullName) { 23 baseName = fullName; 27 if (fullName != fullNameBuffer) { 29 uprv_free(fullName); 30 + if (baseName == fullName) { [all …]
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/dports/www/firefox-esr/firefox-91.8.0/intl/icu-patches/ |
H A D | bug-1714933-2-locale-basename-memory-leak.diff | 11 if (fullName != fullNameBuffer) uprv_free(fullName); 13 - if (other.fullName == other.fullNameBuffer) { 17 + if (other.fullName == other.fullNameBuffer) { 18 fullName = fullNameBuffer; 20 fullName = other.fullName; 23 - if (other.baseName == other.fullName) { 27 baseName = fullName; 31 if (fullName != fullNameBuffer) { 33 uprv_free(fullName); 34 + if (baseName == fullName) { [all …]
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/dports/mail/thunderbird/thunderbird-91.8.0/intl/icu-patches/ |
H A D | bug-1714933-2-locale-basename-memory-leak.diff | 11 if (fullName != fullNameBuffer) uprv_free(fullName); 13 - if (other.fullName == other.fullNameBuffer) { 17 + if (other.fullName == other.fullNameBuffer) { 18 fullName = fullNameBuffer; 20 fullName = other.fullName; 23 - if (other.baseName == other.fullName) { 27 baseName = fullName; 31 if (fullName != fullNameBuffer) { 33 uprv_free(fullName); 34 + if (baseName == fullName) { [all …]
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/dports/textproc/R-cran-stringi/stringi/src/icu55/common/ |
H A D | locid.cpp | 251 uprv_free(fullName); in UOBJECT_DEFINE_RTTI_IMPLEMENTATION() 252 fullName = NULL; in UOBJECT_DEFINE_RTTI_IMPLEMENTATION() 430 uprv_free(fullName); in operator =() 436 fullName = (char *)uprv_malloc(sizeof(char)*(uprv_strlen(other.fullName)+1)); in operator =() 442 uprv_strcpy(fullName, other.fullName); in operator =() 446 baseName = fullName; in operator =() 472 return (uprv_strcmp(other.fullName, fullName) == 0); in operator ==() 487 uprv_free(fullName); in init() 638 baseName = fullName; in initBaseName() 646 return ustr_hashCharsN(fullName, uprv_strlen(fullName)); in hashCode() [all …]
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/dports/www/firefox-legacy/firefox-52.8.0esr/intl/icu/source/common/ |
H A D | locid.cpp | 260 uprv_free(fullName); in UOBJECT_DEFINE_RTTI_IMPLEMENTATION() 261 fullName = NULL; in UOBJECT_DEFINE_RTTI_IMPLEMENTATION() 438 uprv_free(fullName); in operator =() 444 fullName = (char *)uprv_malloc(sizeof(char)*(uprv_strlen(other.fullName)+1)); in operator =() 450 uprv_strcpy(fullName, other.fullName); in operator =() 454 baseName = fullName; in operator =() 480 return (uprv_strcmp(other.fullName, fullName) == 0); in operator ==() 495 uprv_free(fullName); in init() 646 baseName = fullName; in initBaseName() 654 return ustr_hashCharsN(fullName, uprv_strlen(fullName)); in hashCode() [all …]
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/dports/lang/spidermonkey60/firefox-60.9.0/intl/icu/source/common/ |
H A D | locid.cpp | 261 uprv_free(fullName); in UOBJECT_DEFINE_RTTI_IMPLEMENTATION() 262 fullName = NULL; in UOBJECT_DEFINE_RTTI_IMPLEMENTATION() 439 uprv_free(fullName); in operator =() 445 fullName = (char *)uprv_malloc(sizeof(char)*(uprv_strlen(other.fullName)+1)); in operator =() 451 uprv_strcpy(fullName, other.fullName); in operator =() 455 baseName = fullName; in operator =() 481 return (uprv_strcmp(other.fullName, fullName) == 0); in operator ==() 496 uprv_free(fullName); in init() 647 baseName = fullName; in initBaseName() 655 return ustr_hashCharsN(fullName, uprv_strlen(fullName)); in hashCode() [all …]
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/dports/databases/mongodb36/mongodb-src-r3.6.23/src/third_party/icu4c-57.1/source/common/ |
H A D | locid.cpp | 251 uprv_free(fullName); in UOBJECT_DEFINE_RTTI_IMPLEMENTATION() 252 fullName = NULL; in UOBJECT_DEFINE_RTTI_IMPLEMENTATION() 430 uprv_free(fullName); in operator =() 436 fullName = (char *)uprv_malloc(sizeof(char)*(uprv_strlen(other.fullName)+1)); in operator =() 442 uprv_strcpy(fullName, other.fullName); in operator =() 446 baseName = fullName; in operator =() 472 return (uprv_strcmp(other.fullName, fullName) == 0); in operator ==() 487 uprv_free(fullName); in init() 638 baseName = fullName; in initBaseName() 646 return ustr_hashCharsN(fullName, uprv_strlen(fullName)); in hashCode() [all …]
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/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/pathseq/ |
H A D | PSFilterArgumentCollection.java | 49 fullName = IS_HOST_ALIGNED_LONG_NAME, 54 fullName = KMER_FILE_PATH_LONG_NAME, 59 fullName = SKIP_FILTERS_LONG_NAME, 117 fullName = MAX_MASKED_BASES_LONG_NAME, 123 fullName = MIN_BASE_QUALITY_LONG_NAME, 138 fullName = DUST_MASK_QUALITY_LONG_NAME, 143 fullName = DUST_WINDOW_SIZE_LONG_NAME, 151 fullName = DUST_T_SCORE_LONG_NAME, 160 fullName = HOST_MIN_IDENTITY_LONG_NAME, 189 fullName = FILTER_BWA_IMAGE_LONG_NAME, [all …]
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/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/src/jdk.jlink/share/classes/jdk/tools/jlink/internal/ |
H A D | ImageLocationWriter.java | 56 static ImageLocationWriter newLocation(String fullName, 64 if (fullName.startsWith("/modules/")) { 67 } else if ( fullName.startsWith("/packages/")) { 71 int offset = fullName.indexOf('/', 1); 72 if (fullName.length() >= 2 && fullName.charAt(0) == '/' && offset != -1) { 74 fullName = fullName.substring(offset + 1); 77 offset = fullName.lastIndexOf('/'); 80 fullName = fullName.substring(offset + 1); 83 offset = fullName.lastIndexOf('.'); 85 baseName = fullName.substring(0, offset); [all …]
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/dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/src/jdk.jlink/share/classes/jdk/tools/jlink/internal/ |
H A D | ImageLocationWriter.java | 56 static ImageLocationWriter newLocation(String fullName, 64 if (fullName.startsWith("/modules/")) { 67 } else if ( fullName.startsWith("/packages/")) { 71 int offset = fullName.indexOf('/', 1); 72 if (fullName.length() >= 2 && fullName.charAt(0) == '/' && offset != -1) { 74 fullName = fullName.substring(offset + 1); 77 offset = fullName.lastIndexOf('/'); 80 fullName = fullName.substring(offset + 1); 83 offset = fullName.lastIndexOf('.'); 85 baseName = fullName.substring(0, offset); [all …]
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/dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/src/jdk.jlink/share/classes/jdk/tools/jlink/internal/ |
H A D | ImageLocationWriter.java | 56 static ImageLocationWriter newLocation(String fullName, 64 if (fullName.startsWith("/modules/")) { 67 } else if ( fullName.startsWith("/packages/")) { 71 int offset = fullName.indexOf('/', 1); 72 if (fullName.length() >= 2 && fullName.charAt(0) == '/' && offset != -1) { 74 fullName = fullName.substring(offset + 1); 77 offset = fullName.lastIndexOf('/'); 80 fullName = fullName.substring(offset + 1); 83 offset = fullName.lastIndexOf('.'); 85 baseName = fullName.substring(0, offset); [all …]
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/dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/src/jdk.jlink/share/classes/jdk/tools/jlink/internal/ |
H A D | ImageLocationWriter.java | 56 static ImageLocationWriter newLocation(String fullName, 64 if (fullName.startsWith("/modules/")) { 67 } else if ( fullName.startsWith("/packages/")) { 71 int offset = fullName.indexOf('/', 1); 72 if (fullName.length() >= 2 && fullName.charAt(0) == '/' && offset != -1) { 74 fullName = fullName.substring(offset + 1); 77 offset = fullName.lastIndexOf('/'); 80 fullName = fullName.substring(offset + 1); 83 offset = fullName.lastIndexOf('.'); 85 baseName = fullName.substring(0, offset); [all …]
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/dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/src/jdk.jlink/share/classes/jdk/tools/jlink/internal/ |
H A D | ImageLocationWriter.java | 56 static ImageLocationWriter newLocation(String fullName, 64 if (fullName.startsWith("/modules/")) { 67 } else if ( fullName.startsWith("/packages/")) { 71 int offset = fullName.indexOf('/', 1); 72 if (fullName.length() >= 2 && fullName.charAt(0) == '/' && offset != -1) { 74 fullName = fullName.substring(offset + 1); 77 offset = fullName.lastIndexOf('/'); 80 fullName = fullName.substring(offset + 1); 83 offset = fullName.lastIndexOf('.'); 85 baseName = fullName.substring(0, offset); [all …]
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/dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/src/jdk.jlink/share/classes/jdk/tools/jlink/internal/ |
H A D | ImageLocationWriter.java | 56 static ImageLocationWriter newLocation(String fullName, 64 if (fullName.startsWith("/modules/")) { 67 } else if ( fullName.startsWith("/packages/")) { 71 int offset = fullName.indexOf('/', 1); 72 if (fullName.length() >= 2 && fullName.charAt(0) == '/' && offset != -1) { 74 fullName = fullName.substring(offset + 1); 77 offset = fullName.lastIndexOf('/'); 80 fullName = fullName.substring(offset + 1); 83 offset = fullName.lastIndexOf('.'); 85 baseName = fullName.substring(0, offset); [all …]
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/dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/src/jdk.jlink/share/classes/jdk/tools/jlink/internal/ |
H A D | ImageLocationWriter.java | 56 static ImageLocationWriter newLocation(String fullName, 64 if (fullName.startsWith("/modules/")) { 67 } else if ( fullName.startsWith("/packages/")) { 71 int offset = fullName.indexOf('/', 1); 72 if (fullName.length() >= 2 && fullName.charAt(0) == '/' && offset != -1) { 74 fullName = fullName.substring(offset + 1); 77 offset = fullName.lastIndexOf('/'); 80 fullName = fullName.substring(offset + 1); 83 offset = fullName.lastIndexOf('.'); 85 baseName = fullName.substring(0, offset); [all …]
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/dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/src/jdk.jlink/share/classes/jdk/tools/jlink/internal/ |
H A D | ImageLocationWriter.java | 56 static ImageLocationWriter newLocation(String fullName, 64 if (fullName.startsWith("/modules/")) { 67 } else if ( fullName.startsWith("/packages/")) { 71 int offset = fullName.indexOf('/', 1); 72 if (fullName.length() >= 2 && fullName.charAt(0) == '/' && offset != -1) { 74 fullName = fullName.substring(offset + 1); 77 offset = fullName.lastIndexOf('/'); 80 fullName = fullName.substring(offset + 1); 83 offset = fullName.lastIndexOf('.'); 85 baseName = fullName.substring(0, offset); [all …]
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/dports/net/gscloud/gscloud-0.11.0/vendor/github.com/google/go-cmp/cmp/internal/function/ |
H A D | func.go | 76 fullName := fnc.Name() // e.g., "long/path/name/mypkg.(*MyType).(long/path/name/mypkg.myMethod)-fm" 79 fullName = strings.TrimSuffix(fullName, "-fm") 82 for len(fullName) > 0 { 83 inParen := strings.HasSuffix(fullName, ")") 84 fullName = strings.TrimSuffix(fullName, ")") 86 s := lastIdentRx.FindString(fullName) 91 fullName = strings.TrimSuffix(fullName, s) 93 if i := strings.LastIndexByte(fullName, '('); inParen && i >= 0 { 94 fullName = fullName[:i] 96 fullName = strings.TrimSuffix(fullName, ".")
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