Searched refs:gQuiet (Results 1 – 8 of 8) sorted by relevance
/dports/biology/bowtie2/bowtie2-2.4.4/ |
H A D | search_globals.h | 31 extern int gQuiet;
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H A D | bt2_search.cpp | 276 gQuiet = false; in resetOptions() 1269 case ARG_QUIET: gQuiet = true; break; in parseOption() 1731 if(mates1[i] == mates2[j] && !gQuiet) { in parseOptions() 1743 if(useShmem && useMm && !gQuiet) { in parseOptions() 1769 if(!gQuiet) { in parseOptions() 2861 if(!gQuiet) printLocalScoreMsg(ps, paired, true); in setupMinScores() 2870 if(!gQuiet) printEEScoreMsg(ps, paired, true); in setupMinScores() 2874 if(!gQuiet) printEEScoreMsg(ps, paired, false); in setupMinScores() 4333 if(!gQuiet) printLenSkipMsg(*ps, paired, true); in multiseedSearchWorker_2p5() 4337 if(!gQuiet) printLenSkipMsg(*ps, paired, false); in multiseedSearchWorker_2p5() [all …]
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H A D | bt2_dp.cpp | 32 int gQuiet; // print nothing but the alignments variable 66 gQuiet = false; in resetOptions() 293 case ARG_QUIET: gQuiet = true; break; in parseOption() 505 if(!gQuiet) { in parseOptions()
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/dports/biology/hisat2/hisat2-2.2.1/ |
H A D | search_globals.h | 36 extern int gQuiet;
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H A D | hisat_bp.cpp | 71 int gQuiet; // print nothing but the alignments variable 270 gQuiet = false; in resetOptions() 1165 case ARG_QUIET: gQuiet = true; break; in parseOption() 1619 if(mates1[i] == mates2[j] && !gQuiet) { in parseOptions() 1631 if(useShmem && useMm && !gQuiet) { in parseOptions() 1650 if(!gQuiet) { in parseOptions() 3064 if(!gQuiet) printEEScoreMsg(*ps, paired, true); in multiseedSearchWorker_hisat_bp() 3068 if(!gQuiet) printEEScoreMsg(*ps, paired, false); in multiseedSearchWorker_hisat_bp() 3097 if(!gQuiet) printLenSkipMsg(*ps, paired, true); in multiseedSearchWorker_hisat_bp() 3101 if(!gQuiet) printLenSkipMsg(*ps, paired, false); in multiseedSearchWorker_hisat_bp() [all …]
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H A D | hisat2.cpp | 72 int gQuiet; // print nothing but the alignments variable 313 gQuiet = false; in resetOptions() 1324 case ARG_QUIET: gQuiet = true; break; in parseOption() 1950 if(mates1[i] == mates2[j] && !gQuiet) { in parseOptions() 1962 if(useShmem && useMm && !gQuiet) { in parseOptions() 1981 if(!gQuiet) { in parseOptions() 3390 if(!gQuiet) printEEScoreMsg(*ps, paired, true); in multiseedSearchWorker_hisat2() 3394 if(!gQuiet) printEEScoreMsg(*ps, paired, false); in multiseedSearchWorker_hisat2() 3423 if(!gQuiet) printLenSkipMsg(*ps, paired, true); in multiseedSearchWorker_hisat2() 3427 if(!gQuiet) printLenSkipMsg(*ps, paired, false); in multiseedSearchWorker_hisat2() [all …]
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/dports/lang/nqc/nqc-3.1.r6_1/rcxlib/ |
H A D | RCX_Link.cpp | 54 extern bool gQuiet; 237 if (!gQuiet) // play sound when done in Download() 595 if (!gQuiet || gProgramMode) in Download()
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/dports/lang/nqc/nqc-3.1.r6_1/nqc/ |
H A D | nqc.cpp | 220 bool gQuiet = false; variable 378 gQuiet = true; in ProcessCommandLine()
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