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Searched refs:gapless_a_error (Results 1 – 11 of 11) sorted by relevance

/dports/biology/diamond/diamond-2.0.13/src/lib/alp/
H A Dsls_pvalues.cpp306 par_.b_I_error=2.0*par_.G*alp_data::error_of_the_sum(par_.gapless_a_error,par_.a_I_error); in compute_intercepts()
311 par_.b_I_error=2.0*par_.G*alp_data::error_of_the_sum(par_.gapless_a_error,par_.a_J_error); in compute_intercepts()
597 par_tmp.gapless_a_error=par_.gapless_a_error; in get_P_error_using_splitting_method()
957 gumbel_params_.gapless_a<<"\t"<<gumbel_params_.gapless_a_error<<"\t"<< in operator <<()
1067 gumbel_params_.gapless_a>>gumbel_params_.gapless_a_error>> in operator >>()
1242 par_.gapless_a_error<0|| in assert_Gumbel_parameters()
H A Dsls_alignment_evaluer.cpp220 d_params.gapless_a_error = calculation_error; in initGapless()
458 d_params.gapless_a_error = calculation_error; in initGapped()
559 sim_obj.m_GaplessAError = d_params.gapless_a_error; in initGapped()
701 d_params.gapless_a_error=0; in initParameters()
892 d_params.gapless_a_error=0; in initParameters()
H A Dsls_pvalues.hpp106 double gapless_a_error; member
/dports/biology/mmseqs2/MMseqs2-13-45111/lib/alp/
H A Dsls_pvalues.cpp306 par_.b_I_error=2.0*par_.G*alp_data::error_of_the_sum(par_.gapless_a_error,par_.a_I_error); in compute_intercepts()
311 par_.b_I_error=2.0*par_.G*alp_data::error_of_the_sum(par_.gapless_a_error,par_.a_J_error); in compute_intercepts()
597 par_tmp.gapless_a_error=par_.gapless_a_error; in get_P_error_using_splitting_method()
957 gumbel_params_.gapless_a<<"\t"<<gumbel_params_.gapless_a_error<<"\t"<< in operator <<()
1067 gumbel_params_.gapless_a>>gumbel_params_.gapless_a_error>> in operator >>()
1242 par_.gapless_a_error<0|| in assert_Gumbel_parameters()
H A Dsls_alignment_evaluer.cpp220 d_params.gapless_a_error = calculation_error; in initGapless()
458 d_params.gapless_a_error = calculation_error; in initGapped()
559 sim_obj.m_GaplessAError = d_params.gapless_a_error; in initGapped()
701 d_params.gapless_a_error=0; in initParameters()
892 d_params.gapless_a_error=0; in initParameters()
H A Dsls_pvalues.hpp106 double gapless_a_error; member
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/gumbel_params/
H A Dpvalues.cpp168 parameters_set.gapless_a_error = g_params.gapless_a_error; in Run()
H A Dsls_pvalues.cpp290 …double bi_hat_error_=2.0*par_.G*error_of_the_sum(par_.gapless_a,par_.gapless_a_error,par_.a_I,par_… in get_appr_tail_prob_with_cov()
299 …double bj_hat_error_=2.0*par_.G*error_of_the_sum(par_.gapless_a,par_.gapless_a_error,par_.a_J,par_… in get_appr_tail_prob_with_cov()
870 par_tmp.gapless_a_error=par_.gapless_a_error; in get_P_error_using_splitting_method()
H A Dsls_pvalues.hpp94 double gapless_a_error; member
H A Dgumbel_params.cpp380 gumbel_params.gapless_a_error = calculation_error; in Run()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/gumbel_params/
H A Dgumbel_params.hpp374 double gapless_a_error; member